src/db_utils/db_creation.py: creation of 2 new tables: cin_de_event and cin_project_tf

src/db_utils/db_creation.py

@@ -199,6 +199,46 @@ def create_cin_ase_event_table(conn: sqlite3.Connection) -> None:
     conn.commit()
 
 
+def create_cin_project_tf_table(conn: sqlite3.Connection) -> None:
+    """
+    Create table cin_project_splicing_lore
+
+    :param conn: Connection to chia-pet database.
+    """
+    c = conn.cursor()
+    c.execute('''CREATE TABLE IF NOT EXISTS cin_project_tf
+                ([id] INT NOT NULL,
+                [project_name] VARCHAR(45) NULL,
+                [source_db] VARCHAR(45) NOT NULL,
+                [db_id_project] VARCHAR(15) NOT NULL,
+                [tf_name] VARCHAR(45) NOT NULL,
+                [cl_name] VARCHAR(45) NOT NULL,
+                PRIMARY KEY ([id]))''')
+    conn.commit()
+
+
+def create_cin_de_event_table(conn: sqlite3.Connection) -> None:
+    """
+    Create table ase_event.
+
+    :param conn: Connection to chia-pet database.
+    """
+    c = conn.cursor()
+    c.execute('''CREATE TABLE IF NOT EXISTS cin_de_event
+                ([id] INT NOT NULL,
+                [id_project] INT NOT NULL,
+                [gene_id] INT NOT NULL,
+                [baseMean] FLOAT NULL,
+                [log2FoldChange] FLOAT NULL,
+                [pvalue] FLOAT NULL,
+                [padj] FLOAT NULL,
+                PRIMARY KEY ([id]),
+                FOREIGN KEY ([gene_id]) REFERENCES cin_gene([id]),
+                FOREIGN KEY ([id_project]) 
+                REFERENCES cin_project_tf([id]))''')
+    conn.commit()
+
+
 def main_create_db(logging_level: str = "DISABLE"):
     """
     Create an empty chia-pet database.
@@ -223,6 +263,10 @@ def main_create_db(logging_level: str = "DISABLE"):
     create_cin_project_splicing_lore_table(conn)
     logging.debug('Creation of cin_ase_event_table')
     create_cin_ase_event_table(conn)
+    logging.debug('Creation of cin_project_tf table')
+    create_cin_project_tf_table(conn)
+    logging.debug('Creation of cin_de_event table')
+    create_cin_de_event_table(conn)
 
 
 if __name__ == "__main__":