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Created with Raphaël 2.2.029Jan272522203Dec9Oct29Sep931Aug1724Jul20138730Jun29212May27Apr2321201731Mar302725247Feb17Jan138713Dec9628Nov27222018136518Oct18Jul12Jun117429May28232221201716151410973217Apr1612929Mar28272625222120137654120Feb15107521Dec2019141326Oct242316121110986543226Sep2524201817141331Aug292724232221231Jul3027262524231312327Jun20191876samtools: change label for bam_statssamtools: add bam_stats processnextflow.config: add memory limitspicard: fix uper memory limit to 30GBpicard: fix bams var in main.nfbedtools: add bam_id valsamtools: fix filter_bam_mappedbedtools: bam_to_fastq emits tuplebedtools: fix bam_to_fastq scriptbedtools: fix tagssamtools: fix catched bams namessamtools: fix samtools versionbedtools: fix output value name for bam_to_fastq_pairedendbedtools: change bam_to_fastq_pairedend name to be more consistantfix input and output for bedtools and samtoolsbedtools: add bam to fastq convertionsamtools: nf_module add mapped and unmapped filtersratoolkit: rename main modulenf_module: sratoolkit add DSL2nf_modules: add deeptools to DSL2nf_modules: add sambamba to DSL2nf_modules: add samtools DSL2nf_modules: add picardnf_modules: multiqc add DSL2nf_modules: fastqc add DSL2nf_modules: masc2 add DSL2nf_modules: add bowtie to DSL2nextflow.config: change queue list for psmnnextflow.config: add missing space :40solution_RNASeq.nf: update to DSL2nf_module: set index to be the 2nd input for mappingsolution_RNASeq.nf: add command to launch pipelinenf_modules: add kallisto to DSL2nf_modules: add bedtools for DSL2nf_modules: add urqt for DSL2nf_modules: add DSL2 for cutadaptnextflow.config: add generic config file for module usenf_modules: add DSL2 module for bowtie2fix r-base 4.0.2add ribotricer docker module