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Created with Raphaël 2.2.02Jul30Jun29282422211716942131May28262521201817121110765329Apr28272622212019161514138225Mar22171615121110985225Feb242220181715104329Jan272522203Dec9Oct29Sep931Aug1724Jul20138730Jun29212May27Apr2321201731Mar302725247Feb17Jan138713Dec9628Nov27222018136518Oct18Jul12Jun117429May28232221201716151410973217Apr1612929Mar282726252221fix typo in *.mdfix typo in .md fileskb: change --lamano option into --workflow lamanobioawk: fix fasta2transcriptslength processkb: fix missing line :330gatk4: rename _out option for gvcfgatk4: add gvcf to variant_calling_outdocker: add htseq 0.13.5gatk4: change file_prefix definition to handle Mapgatk4: remove map only usefull for testingexample_variant_calling.nf: fix input channelgatk4: working variant calling pipelineexample_marseq.nf: cosmetic changesdeeptools: fix docker file for 3.5.1deeptools: add libcurl3 dependencymutliqc: add flatten stepbowtie2: fix switch :67multiqc: fix process namemultiqc: add comments on usagemultiqc: add workflow to perform report channel cleanningcleanup DSL1 test.shswitcth to nextflow DSL2Docker: add emase 0.10.16v2.0.0v2.0.0example_marseq.nf: add log for config fileexample_marseq.nf: add vecloty examplekb: add velocity workflowexample_variant_calling.nf: fix fasta varfix typoexample_variant_calling.nf: fix typo :12gatk4: fix include pathgatk4: fix include pathfix emit: for named workflowadd example of variant calling with gatk4bwa: add mapping workflowgatk4: first version of new variant calling workflowemase-zero: remove collect() :20emaze: change input to follow change to t2g in kb main.nfexample_marseq.nf: add illumina adaptor removalworking example of marseq analysiskb: working marseq quantif pipeline