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LBMC
nextflow
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986ed55b51f5bf8c1bbf7226eb7350bcd64dd478
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ucsc: update bigwig2_to_wig2 to match changes in bigwig_to_wig
ucsc: fix var name in bigwig_to_wig
ucsc: add scape :55
ucsc: improve bigwig_to_wig
samtools: fix process name :79
samtools: add rm_from_bam process
samtools: fix bug :21
samtools: add gzip for samtools faidx
danpos: fix danpos line return
ucsc: remote - from bigWigToWig
danpos: remove trace of DSL1
danpos: change publishDir capture pattern
danpos: fix file_id handling
danpos: change channel cardinality
rasusa: fix file_id variable
danpos: fix channel name
emase-zero: remove personalized gene_to_transcript file
danpos: change bg to bw
danpos: simplify bg2wig import
emase-zero: fix stderr redirection
emase-zero: fix output redirection
emase-zero: redirect all output to report file
emase-zero: update error handling
emase-zero: fix gene_to_transcript file to add strain info to gene name
emase-zero.nf: change cardinality of the inputs
danpos: add bg input
uscc: add bigwig_to_wig process
nf_modules: add danpos
emase: add diploid_genome process
rasusa: add default to no subsampling
Docker: add rasusa img compatible with nf
rasusa: fix multiple bug
nf_modules: add rasusa
src/nextflow.config: add podman profile
Docker emase: add ps
emase: fix output variable
emase: update input format
emase: add diploid_genome process
CONTRIBUTING.md: fix bug in file_prefix definition
doc/building_your_pipeline.md: update psmn frontal
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