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Created with Raphaël 2.2.026Oct25212019181514121187654130Sep29242321124Aug23201918171623Jul22211915139875230Jun29282422211716942131May28262521201817121110765329Apr28272622212019161514138225Mar22171615121110985225Feb242220181715104329Jan272522203Dec9Oct29Sep931Aug1724Jul20138730Jun29212May27Apr2321201731Mar302725247Feb17Jan138713Dec9628Nov27222018136danpos: add -b to dpos_wigdanspo: fix dpos_bw wig outputdanspo: fix dpos_wig outputuscs: fix typo in input definition :19danpos: fix typo :131ucsc: fix typos in inputs channeluscs: rename bigwig_to_bedgraph to bigwig1_to_bedgraph1danspo: rename channel bedgraph -> bgucsc: fix typo :53 & :69ucsc: fix typo :66 & :49danpos: fix call to wig_to_bedgraphuscs: modify wig_to_bedgraphdanpos: fix fastq imput cardinalitydanpos: change the way to compute fastq sizedanpos: allow collect for fastq input to determine if data are paired-enddanpos: revert last commitucsc: add missing index input :158danpos: rm wce wig from outputdanpos: remove folder from the outputsdanspo: add overwrite: true for publishDiragat: add params to convertion processessrc/example_chipseq.nf: work in progress of chip-seq exampleucsc: add bedgraph_to_wig.pl to Dockerucsc: wig_to_bedgraph replace by an awk cmducsc: fix wig_to_bedgraph processesdanspo: fix typo::72dpos: fix typo :67danpos: re-add wce for dpos_bamdpos: remove bgpos for dposdanpos: replace peaks by positions for dpos outputsdanpos: rm position.summit not present for dposdanpos: rm "pooled" from output catchuscs: fix of wig_to_bedgraphdanpos: remove wce for dpos to follow recommandationsucsc: fix output names :74danpos: add include for wig2_to_bedgraph2danpos: add wig to bg convertion to each workflowucsc: add wig2_to_bedgraph2danpos: add xls to bed convertion in every processucsc: rm wig2bedgraph process