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Created with Raphaël 2.2.020Nov18136518Oct18Jul12Jun117429May28232221201716151410973217Apr1612929Mar28272625222120137654120Feb15107521Dec2019141326Oct242316121110986543226Sep2524201817141331Aug292724232221231Jul3027262524231312327Jun2019187654131May3025nf_modules: add STARupdate docker script for v0.4.0docker_files: add starversion 0.4.0add update_config.sh file to update to the last config versionconda_packages.sh: fix CONDA_ENVS varconda_packages.sh: add CONDA_ENVS def.conda_packages.sh: fix conda init linkconda: add start 2.7.3anf_modules: rm ccin2p3_conda section in config filesnf_modules: bowtie fixe conda pathconda_psmn: fix path of the scripts in configs filesconda_psmn.sh: hide filetraining_dataset.config: fix psmn pathtraining_dataset.config: update conda_psmn.sh path to use $workflowtraining_dataset.config: update conda path to use .conda_envs linkpsmn: add symlink to conda envstraining_dataset.config: update CONDA_ENVStraining_dataset.config: update config to match latest changeshide src/* files not necessary for usersrename Kallisto_index.pbs to have more explicite namePSMN: add install script for conda modulesnf: change psmn config to use condaDocker: update name of module to lbmc/module:versionsingularity: update configs to use docker hub and specified cacheDirdocker: change config file to use lbmc/ docker repositorydocker: add script to update docker image to new tag with lbmcdocker: add script to push every img on docker hubREADME.md: update list of projectsv0.4.0v0.4.0README.md: add list of nextflow projectsMerge branch 'master' of gitlab_lbmc:pipelines/nextflowREADME.md: put list of available tools in another fileDocker: umi_tools: fix dependecies listREADME.md: mv getting started in a new fileadd mail for tpfastqdump.nf: force tmp file to be in the right placetest of static websitefastp singularity: fix sps and pbs pathsubread singularity: fix sps and pbs pathbowtie nf: change report max size from 15 line to 19