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tophat dockerfile : fix beug and add bowtie1 installation

Merged elabaron requested to merge elabaron/nextflow:master into master
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FROM ubuntu:20.04
MAINTAINER Emmanuel Labaronne
ENV RIBOTRICER_VERSION=1.3.2
ENV PACKAGES python3\
python3-dev\
python3-pip
RUN apt-get update && \
apt-get install -y ${PACKAGES} && \
apt-get clean
RUN pip3 install ribotricer==${RIBOTRICER_VERSION}
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