Commits · f8dba601a8cc93674a449473d085a5a0e32fb9da · LBMC / nextflow · GitLab

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Apr 17, 2020
- update psmn config to new queues · c116038b
  Laurent Modolo authored 4 years ago
  
  Unverified
  
  c116038b
Nov 28, 2019
- training_dataset.config: remove mail alert from ccin2p3 · 3efbbb5e
  Laurent Modolo authored 5 years ago
  
  Unverified
  
  3efbbb5e
- training_dataset.config: add mail report · 4abd43f1
  Laurent Modolo authored 5 years ago
  
  Unverified
  
  4abd43f1
- training_dataset.config: final fix for in2p3 cacheDir · 5a8a415b
  Laurent Modolo authored 5 years ago
  
  Unverified
  
  5a8a415b
- training_dataset.config: fix cacheDir for singularity in2p3 · 75b8a82d
  Laurent Modolo authored 5 years ago
  
  Unverified
  
  75b8a82d
- training_dataset.config: add ccin2p3 section · 656b8f8d
  Laurent Modolo authored 5 years ago
  
  Unverified
  
  656b8f8d
Nov 18, 2019
- version 0.4.0 · 4734f32a
  Laurent Modolo authored 5 years ago
  
  Unverified
  
  4734f32a
Nov 06, 2019
- conda_psmn: fix path of the scripts in configs files · b43a5a48
  Laurent Modolo authored 5 years ago
  
  Unverified
  
  b43a5a48
- training_dataset.config: fix psmn path · e55b6d4f
  Laurent Modolo authored 5 years ago
  
  e55b6d4f
- training_dataset.config: update conda_psmn.sh path to use $workflow · d5e47faa
  Laurent Modolo authored 5 years ago
  
  Unverified
  
  d5e47faa
- training_dataset.config: update conda path to use .conda_envs link · e18e8c9c
  Laurent Modolo authored 5 years ago
  
  Unverified
  
  e18e8c9c
- training_dataset.config: update CONDA_ENVS · beac4302
  Laurent Modolo authored 5 years ago
  
  Unverified
  
  beac4302
- training_dataset.config: update config to match latest changes · ffb23d50
  Laurent Modolo authored 5 years ago
  
  Unverified
  
  ffb23d50
May 17, 2019
- config files: updater monocore queues for psmn · 21a8f8b8
  Laurent Modolo authored 5 years ago
  
  Verified
  
  21a8f8b8
Apr 16, 2019
- change .sif to .img for singularity img · a972f993
  Laurent Modolo authored 5 years ago
  
  Verified
  
  a972f993
Mar 20, 2019
- fix training_dataset pipeline · 7fa6b2d4
  Laurent Modolo authored 6 years ago
  
  Unverified
  
  7fa6b2d4
Oct 26, 2018
- nf modules config: remove cpus info · 03f44eef
  Laurent Modolo authored 6 years ago
  
  Unverified
  
  03f44eef
Oct 24, 2018
- training_dataset.config: update psmn config · 9a24a86d
  Laurent Modolo authored 6 years ago
  
  Unverified
  
  9a24a86d
Oct 23, 2018
- nf module: update executor from psmn to sge · 9fdc0424
  Laurent Modolo authored 6 years ago
  
  Unverified
  
  9fdc0424
- nf config file update nf syntax for process · 3e2c83f3
  Laurent Modolo authored 6 years ago
  
  Unverified
  
  3e2c83f3
- change occurences of sge into psmn · cdb93acd
  Laurent Modolo authored 6 years ago
  
  Unverified
  
  cdb93acd
Aug 24, 2018
- training_dataset: add bam indexing step · 3bc22f3a
  Laurent Modolo authored 6 years ago
  
  Unverified
  
  3bc22f3a
Aug 23, 2018
- add pipeline to create training dataset · 6f2eec1e
  Laurent Modolo authored 6 years ago
  
  Verified
  
  6f2eec1e