Commits · aee8008b7aec9480a7794c10f8b1b010e33edf4c · LBMC / nextflow · GitLab

Snippets Groups Projects

Jun 06, 2018
- cutadapt.config: add index and map config · aee8008b
  elabaron authored Jun 6, 2018
  
  aee8008b
- RNAseq.ng: add kallisto index and mapping blocks · f07cbf2d
  elabaron authored Jun 6, 2018
  
  f07cbf2d
- cutadapt.config : bedtools config · 58d639c8
  elabaron authored Jun 6, 2018
  
  58d639c8
- RNAseq.nf : add bedtools block · d28f6bf4
  elabaron authored Jun 6, 2018
  
  d28f6bf4
- cutadapt.config : add trimming process · fa17b787
  elabaron authored Jun 6, 2018
  
  fa17b787
- RNAseq.nf : add UrQt block · 663adcc5
  elabaron authored Jun 6, 2018
  
  663adcc5
- cutadapt.config : config adaptor_removal process · 0620f6b2
  elabaron authored Jun 6, 2018
  
  0620f6b2
- RNAseq.nf : create adaptor_removal block · dd17f66a
  elabaron authored Jun 6, 2018
  
  dd17f66a
- sampler_fasta.nf : add sample name in the output · 03ab1966
  elabaron authored Jun 6, 2018
  
  03ab1966
- sampler_fasta.nf : add copy output · d1947a2c
  elabaron authored Jun 6, 2018
  
  d1947a2c
- fasta_sampler.nf : add Channel · bc709511
  elabaron authored Jun 6, 2018
  
  bc709511
- fasta_sampler.nf : add process · 8aa7a13a
  elabaron authored Jun 6, 2018
  
  8aa7a13a
- TP.md: add nextflow options · 6289b049
  Laurent Modolo authored Jun 6, 2018
  
  Verified
  
  6289b049
- Merge branch 'master' of gitlab_lbmc:pipelines/nextflow · b8f2a45f
  Laurent Modolo authored Jun 6, 2018
  
  Verified
  
  b8f2a45f
- add sge config for some modules · 3454e1e8
  Laurent Modolo authored Jun 6, 2018
  
  Verified
  
  3454e1e8
- TP.md: fix typo · 1e57a68d
  Laurent Modolo authored Jun 6, 2018
  
  View commits for tag v0.1.2 v0.1.2 Verified
  
  1e57a68d
- TP.md: PSMN section · 98db0358
  Laurent Modolo authored Jun 6, 2018
  
  Verified
  
  98db0358
- Kallisto.nf: fix paired end · 0dba9f2b
  Laurent Modolo authored Jun 6, 2018
  
  Verified
  
  0dba9f2b
- Kallisto.nf: fix paired name · 1c82c356
  Laurent Modolo authored Jun 6, 2018
  
  Verified
  
  1c82c356
- urqt.nf: improve input · a97e28f0
  Laurent Modolo authored Jun 6, 2018
  
  Verified
  
  a97e28f0
- trimming: make output channel more clear · 52d58451
  Laurent Modolo authored Jun 6, 2018
  
  Verified
  
  52d58451
- TP.md: add info on project visibility · 462e3dd0
  Laurent Modolo authored Jun 6, 2018
  
  Verified
  
  462e3dd0
- TP.md: add Kallisto section · efbf5499
  Laurent Modolo authored Jun 6, 2018
  
  Verified
  
  efbf5499
- TP.md: add bedtool section · 955c41f2
  Laurent Modolo authored Jun 6, 2018
  
  Verified
  
  955c41f2
- BEDtools: add tests files · b6575e65
  Laurent Modolo authored Jun 6, 2018
  
  Verified
  
  b6575e65
- UrQt: fix docker container version · 4d440098
  Laurent Modolo authored Jun 6, 2018
  
  Verified
  
  4d440098
- mv test.sh file from docker_modules to nf_modules · 8aee48b9
  Laurent Modolo authored Jun 6, 2018
  
  Verified
  
  8aee48b9
- doc: add webide.png · d254a0d5
  Laurent Modolo authored Jun 6, 2018
  
  Verified
  
  d254a0d5
- TP.md: add cutadapt.config section · 7449f56c
  Laurent Modolo authored Jun 6, 2018
  
  Verified
  
  7449f56c
Jun 05, 2018
- TP.md: add cutadapt and urqt section · f495e035
  Laurent Modolo authored Jun 5, 2018
  
  Verified
  
  f495e035
- TP.md: fasta_sampler section · 8a2d1d85
  Laurent Modolo authored Jun 5, 2018
  
  Verified
  
  8a2d1d85
- TP.md: add definition of process and channel · 46372ef3
  Laurent Modolo authored Jun 5, 2018
  
  Verified
  
  46372ef3
- TP.md: add correction · 4ef2883d
  Laurent Modolo authored Jun 5, 2018
  
  Verified
  
  4ef2883d
- TP.md: add nf_modules section · a0c710af
  Laurent Modolo authored Jun 5, 2018
  
  Verified
  
  a0c710af
- TP.md: add sge_module section · 206b5fa6
  Laurent Modolo authored Jun 5, 2018
  
  Verified
  
  206b5fa6
- TP.md: write docker_modules section · 4bd58c06
  Laurent Modolo authored Jun 5, 2018
  
  Verified
  
  4bd58c06
- README.md : fix docker path · e4c2f33f
  Laurent Modolo authored Jun 5, 2018
  
  Verified
  
  e4c2f33f
- docker_modules: fix path · 1c45e57b
  Laurent Modolo authored Jun 5, 2018
  
  Verified
  
  1c45e57b
- mv nf files to nf_modules · 705226a9
  Laurent Modolo authored Jun 5, 2018
  
  Verified
  
  705226a9
- correctly mv nf_modules · 4fa9a1b1
  Laurent Modolo authored Jun 5, 2018
  
  Verified
  
  4fa9a1b1