Commits · 92058047eff9986ee9585aa86c30c5aafd851b59 · LBMC / nextflow · GitLab

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Mar 14, 2022
- src/nf_modules/hisat2/main.nf: remove default parameters · 92058047
  Laurent Modolo authored 3 years ago
  
  Verified
  
  92058047
Mar 01, 2022
- hisat2: remove samtools report · c6865206
  Laurent Modolo authored 3 years ago
  
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  c6865206
- hisat2: change report file name · 170a745c
  Laurent Modolo authored 3 years ago
  
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  170a745c
- hisat2: change report file name · 600ee64e
  Laurent Modolo authored 3 years ago
  
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  600ee64e
Feb 28, 2022
- src/nf_modules/hisat2/main.nf · d5cf091f
  Laurent Modolo authored 3 years ago
  
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  d5cf091f
Jan 06, 2022
- hisat2: add main.nf · b6110260
  Laurent Modolo authored 3 years ago
  
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  b6110260
Sep 01, 2021
- bowtie2: simplify index name · 55144a92
  Laurent Modolo authored 3 years ago
  
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  55144a92
Jun 04, 2021
- bowtie2: fix switch :67 · c05b8c6a
  Laurent Modolo authored 4 years ago
  
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  c05b8c6a
May 18, 2021
- bowtie2: change file_id handling · 192fef09
  Laurent Modolo authored 4 years ago
  
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  192fef09
Apr 16, 2021
- nf_modules: fix paired-single end handling · 481dc0d4
  Laurent Modolo authored 4 years ago
  
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  481dc0d4
Apr 15, 2021
- bowtie2: fix missing variable :49 · b5b2bda7
  Laurent Modolo authored 4 years ago
  
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  b5b2bda7
Apr 14, 2021
- CONTRIBUTING.md: add info on channel creation · dbbbac30
  Laurent Modolo authored 4 years ago
  
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  dbbbac30
- bowtie2: replace pair_id by file_id · 7c1e0c6c
  Laurent Modolo authored 4 years ago
  
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  7c1e0c6c
- bowtie2: fix input tuple :45 · 5de7aac6
  Laurent Modolo authored 4 years ago
  
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  5de7aac6
- bowtie2: update to match contributing.md · fd494cd5
  Laurent Modolo authored 4 years ago
  
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  fd494cd5
Apr 08, 2021
- nf_modules: add params.<process_names> for each process · 4a7355a2
  Laurent Modolo authored 4 years ago
  
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  4a7355a2
Mar 12, 2021
- add paired_end and single_end switch version to all implementations · e4d5b19b
  Laurent Modolo authored 4 years ago
  
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  e4d5b19b
Feb 03, 2021
- nf_module: remove publishDir instruction · ed7fec13
  Laurent Modolo authored 4 years ago
  
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  ed7fec13
Jan 29, 2021
- nf_modules: update output tuple to handle list as file_id · 28a831bf
  Laurent Modolo authored 4 years ago
  
  Unverified
  
  28a831bf
Jan 22, 2021
- nf_module: set index to be the 2nd input for mapping · cecad357
  Laurent Modolo authored 4 years ago
  
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  cecad357
Jan 20, 2021
- nf_modules: add DSL2 for cutadapt · 3490e2f1
  Laurent Modolo authored 4 years ago
  
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  3490e2f1
- nf_modules: add DSL2 module for bowtie2 · 209cb4b1
  Laurent Modolo authored 4 years ago
  
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  209cb4b1