Commits · 3b208403c75a3d1e4c843b53de65a5b90c1f51b6 · LBMC / nextflow · GitLab

Snippets Groups Projects

Feb 04, 2021
- docker: add deeptools 3.5.0 · 3b208403
  Laurent Modolo authored 4 years ago
  
  Verified
  
  3b208403
- docker: add ucsc:407 · 81ab1116
  Laurent Modolo authored 4 years ago
  
  Verified
  
  81ab1116
Jan 29, 2021
- docker: add samtools v1.11 · 962ac77e
  Laurent Modolo authored 4 years ago
  
  Unverified
  
  962ac77e
Jan 20, 2021
- fix r-base 4.0.2 · 9b4d697a
  Laurent Modolo authored 4 years ago
  
  Unverified
  
  9b4d697a
Oct 09, 2020
- nf_module update practical example to use withLabel instead of withName · 5cdad1d7
  Laurent Modolo authored 4 years ago
  
  Unverified
  
  5cdad1d7
Sep 09, 2020
- docker: fix r path in doker_init.sh · f318f0ff
  Laurent Modolo authored 4 years ago
  
  Unverified
  
  f318f0ff
- docker: add sabre 039a55e · 4c24548d
  Laurent Modolo authored 4 years ago
  
  Unverified
  
  4c24548d
Aug 31, 2020
- docker: mv r folder to r-base folder to be consistent with img names · fcb7af24
  Laurent Modolo authored 4 years ago
  
  Unverified
  
  fcb7af24
- docker: add r-base 4.0.2 · 0415e251
  Laurent Modolo authored 4 years ago
  
  Unverified
  
  0415e251
Aug 17, 2020
- docker: add bash to g2gtools:0.2.8 · 62c9c2ea
  Laurent Modolo authored 4 years ago
  
  Unverified
  
  62c9c2ea
- docker: add bash to g2gtools:0.2.7 · 45e909cd
  Laurent Modolo authored 4 years ago
  
  Unverified
  
  45e909cd
- gffread: fix missing \ in Dockerfile · a61d4601
  Laurent Modolo authored 4 years ago
  
  Unverified
  
  a61d4601
Jul 24, 2020
- docker: add bash to gffread:0.11.8 · 92007b4a
  Laurent Modolo authored 4 years ago
  
  Unverified
  
  92007b4a
- docker: add gffread:0.11.8 · 48c10de5
  Laurent Modolo authored 4 years ago
  
  Unverified
  
  48c10de5
Jul 20, 2020
- docker: add kallistobustools:0.39.3 with t2g.py · 26a87183
  Laurent Modolo authored 4 years ago
  
  Unverified
  
  26a87183
Jul 13, 2020
- docker: add crossmap:0.4.1 · e4e83076
  Laurent Modolo authored 4 years ago
  
  Unverified
  
  e4e83076
- docker: add ucsc:400 · 4d4b9c97
  Laurent Modolo authored 4 years ago
  
  Unverified
  
  4d4b9c97
- docker: add bedops:2.4.39 · bda23695
  Laurent Modolo authored 4 years ago
  
  Unverified
  
  bda23695
Jun 30, 2020
- docker: add freebayes 1.3.2 · a037e558
  Laurent Modolo authored 4 years ago
  
  Unverified
  
  a037e558
- docker: add bamutils 1.0.14 · cc105980
  Laurent Modolo authored 4 years ago
  
  Unverified
  
  cc105980
Jun 02, 2020
- docker: add r4.0.0 · 04c020ae
  Laurent Modolo authored 4 years ago
  
  Unverified
  
  04c020ae
May 12, 2020
- docker: fix last:1060 module · aed09edd
  Laurent Modolo authored 4 years ago
  
  Unverified
  
  aed09edd
- docker: add r3.6.2 · b453de8a
  Laurent Modolo authored 4 years ago
  
  Unverified
  
  b453de8a
Apr 23, 2020
- docker: gatk3 increase java memory · 343b5dd4
  Laurent Modolo authored 5 years ago
  
  Unverified
  
  343b5dd4
Apr 21, 2020
- docker: add kallistobustools container · 172c6ed9
  Laurent Modolo authored 5 years ago
  
  Unverified
  
  172c6ed9
Mar 31, 2020
- Dockerfile: increase Xmx of java tools · d752181f
  Laurent Modolo authored 5 years ago
  
  Unverified
  
  d752181f
Mar 27, 2020
- Picard: increase java default memory · 5a7f36eb
  Laurent Modolo authored 5 years ago
  
  Unverified
  
  5a7f36eb
- Dockerfile: last add script to bin · c2fd8aa4
  Laurent Modolo authored 5 years ago
  
  Unverified
  
  c2fd8aa4
- docker: add last version 1060 · 339a3a62
  Laurent Modolo authored 5 years ago
  
  Unverified
  
  339a3a62
Mar 24, 2020
- Docker: gatk3 fix arguments parsing · 66cb84e1
  Laurent Modolo authored 5 years ago
  
  Unverified
  
  66cb84e1
- Dockerfile: gatk3 add gatk3 executable script · cadb073c
  Laurent Modolo authored 5 years ago
  
  Unverified
  
  cadb073c
Jan 08, 2020
- umi_tools: Dockerfile, fix dependences · 6fa60ca9
  Laurent Modolo authored 5 years ago
  
  Unverified
  
  6fa60ca9
Dec 09, 2019
- docker: gatk3 fix licence problem · 9bf9ce0e
  Laurent Modolo authored 5 years ago
  
  Unverified
  
  9bf9ce0e
Dec 06, 2019
- docker_modules: add gatk3.8.0 · eb29dd1f
  Laurent Modolo authored 5 years ago
  
  Unverified
  
  eb29dd1f
Nov 20, 2019
- docker: fix ucsc img · 2835b4b2
  Laurent Modolo authored 5 years ago
  
  Unverified
  
  2835b4b2
- docker: add liftover:357 · 4184614b
  Laurent Modolo authored 5 years ago
  
  Unverified
  
  4184614b
- docker: change FROM url to add lbmc/ prefix · aa85921f
  Laurent Modolo authored 5 years ago
  
  Unverified
  
  aa85921f
- docker: change FROM url to add lbmc/ prefix · 81768be1
  Laurent Modolo authored 5 years ago
  
  Unverified
  
  81768be1
- update docker script for v0.4.0 to automatise push · 7064340c
  Laurent Modolo authored 5 years ago
  
  Unverified
  
  7064340c
- update docker script for v0.4.0 · 28cb6941
  Laurent Modolo authored 5 years ago
  
  Unverified
  
  28cb6941