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Verified Commit f842d100 authored by Laurent Modolo's avatar Laurent Modolo
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training_dataset.nf: add command example in header

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......@@ -11,6 +11,13 @@ input:
output:
- sort fasta
- sort fastq
example for paired-end data:
./nextflow src/training_dataset.nf -c src/training_dataset.config --fasta "data/genome.fa" --fastq_paired "data/BNLN16.R{1,2}*" --chromosome "X" --start 5305683 --stop 5333928 -resume
example for single-end data:
./nextflow src/training_dataset.nf -c src/training_dataset.config --fasta "data/genome.fa" --fastq_single "data/BNLN16.R1*" --chromosome "X" --start 5305683 --stop 5333928 -resume
*/
params.fastq_paired = ""
......
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