kallisto: add ccin2p3_conda profile for indexing

src/nf_modules/kallisto/indexing.config

@@ -48,4 +48,20 @@ profiles {
       }
     }
   }
+  ccin2p3_conda {
+    process{
+      withName: index_fasta {
+        beforeScript = "source /sps/lbmc/common/miniconda2/init.sh"
+        conda = "/sps/lbmc/common/miniconda2/envs/kallisto_0.44.0"
+        scratch = true
+        stageInMode = "copy"
+        stageOutMode = "rsync"
+        executor = "sge"
+        clusterOptions = "-P P_lbmc -l os=cl7 -l sps=1 -r n"
+        cpus = 1
+        memory = "10GB"
+        time = "24h"
+      }
+    }
+  }
 }