Skip to content
Snippets Groups Projects
Verified Commit d2e7b69c authored by Laurent Modolo's avatar Laurent Modolo
Browse files

fastp: update accel_1splus protocol

parent c98150b9
Branches
No related tags found
No related merge requests found
Show whitespace changes
Inline Side-by-side
src/nf_modules/fastp/main.nf
+ 55
− 57
View file @ d2e7b69c
...@@ -102,8 +102,7 @@ fastp --thread ${task.cpus} \ ...@@ -102,8 +102,7 @@ fastp --thread ${task.cpus} \
fastp --thread ${task.cpus} \ fastp --thread ${task.cpus} \
--stdin \ --stdin \
--trim_front1=10 \ --trim_front1=10 \
--trim_tail1=10 \ --trim_front2=10 \
--trim_tail2=10 \
--qualified_quality_phred 20 \ --qualified_quality_phred 20 \
--disable_length_filtering \ --disable_length_filtering \
--detect_adapter_for_pe \ --detect_adapter_for_pe \
...@@ -124,7 +123,6 @@ fastp --thread ${task.cpus} \ ...@@ -124,7 +123,6 @@ fastp --thread ${task.cpus} \
fastp --thread ${task.cpus} \ fastp --thread ${task.cpus} \
--stdin \ --stdin \
--trim_front1=10 \ --trim_front1=10 \
--trim_tail1=10 \
--qualified_quality_phred 20 \ --qualified_quality_phred 20 \
--disable_length_filtering \ --disable_length_filtering \
--detect_adapter_for_pe \ --detect_adapter_for_pe \
......
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Please register or to comment