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Verified Commit cd7e4a19 authored by Laurent Modolo's avatar Laurent Modolo
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src/nf_modules/gffread/main.nf: fix typo :59

parent 566d96a1
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...@@ -56,7 +56,7 @@ process spliced_cds { ...@@ -56,7 +56,7 @@ process spliced_cds {
""" """
gzip -dc ${fasta} > ${fasta.simpleName}_un.fasta gzip -dc ${fasta} > ${fasta.simpleName}_un.fasta
gzip -dc ${gtf} > ${gtf.simpleName}_un.gtf gzip -dc ${gtf} > ${gtf.simpleName}_un.gtf
gffread -x -M - -g ${fasta.simpleName}_un.fasta ${gtf.simpleName}_un.gtf \ gffread -x -M -g ${fasta.simpleName}_un.fasta ${gtf.simpleName}_un.gtf \
> ${file_prefix}.fasta > ${file_prefix}.fasta
""" """
} }
\ No newline at end of file
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