BEDtools: update nf config file for PSMN

src/nf_modules/BEDtools/fasta_from_bed.config

@@ -3,23 +3,21 @@ profiles {
     docker.temp = 'auto'
     docker.enabled = true
     process {
-      $fasta_from_bed {
+      withName: fasta_from_bed {
         container = "bedtools:2.25.0"
       }
     }
   }
   sge {
     process{
-      $fasta_from_bed {
-        beforeScript = "module purge; module load BEDtools/2.25.0"
+      withName: fasta_from_bed {
+        beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
+        module = "BEDtools/2.25.0"
         executor = "sge"
         cpus = 1
-        memory = "5GB"
-        time = "6h"
-        queueSize = 1000
-        pollInterval = '60sec'
-        queue = 'h6-E5-2667v4deb128'
-        penv = 'openmp8'
+        memory = "20GB"
+        time = "12h"
+        queue = 'monointeldeb128'
       }
     }
   }