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Verified Commit ad8474e6 authored by Laurent Modolo's avatar Laurent Modolo
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fastp: fix output to capture json files

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src/nf_modules/fastp/main.nf
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...@@ -12,7 +12,7 @@ process fastp_pairedend { ...@@ -12,7 +12,7 @@ process fastp_pairedend {
output: output:
tuple val(pair_id), path("*.fastq.gz"), emit: fastq tuple val(pair_id), path("*.fastq.gz"), emit: fastq
tuple val(pair_id), path("*.{zip,html}"), emit: report tuple val(pair_id), path("*.{zip,html,json}"), emit: report
script: script:
""" """
...@@ -40,7 +40,7 @@ process fastp_singleend { ...@@ -40,7 +40,7 @@ process fastp_singleend {
output: output:
tuple val(pair_id), path("*.fastq.gz"), emit: fastq tuple val(pair_id), path("*.fastq.gz"), emit: fastq
tuple val(pair_id), path("*.{zip,html}"), emit: report tuple val(pair_id), path("*.{zip,html,json}"), emit: report
script: script:
""" """
......
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