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Verified Commit 94b9d77f authored by Laurent Modolo's avatar Laurent Modolo
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add CITE-seq_count

parent 4eb67fb8
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FROM ubuntu:22.04
ENV CITESEQ_VERSION=1.4.5
ENV PACKAGES procps locales gcc libstdc++-10-dev libcurl4 libc6 python3 python3-pip python3-dev
RUN apt-get update && \
apt-get install -y --no-install-recommends ${PACKAGES} && \
apt-get clean
RUN locale-gen en_US.UTF-8
ENV LC_ALL=en_US.utf-8
ENV LANG=en_US.utf-8
ENV LC_ALL=C.UTF-8
ENV LANG=C.UTF-8
RUN pip3 install CITE-seq-Count==${CITESEQ_VERSION}
#!/bin/sh
docker pull lbmc/cite_seq_count:1.4.5
docker build src/.docker_modules/CITE-seq-Count/1.4.5 -t 'lbmc/cite_seq_count:1.4.5'
docker push lbmc/cite_seq_count:1.4.5
# docker buildx build --platform linux/amd64,linux/arm64 -t "lbmc/cite_seq_count:1.4.5" --push src/.docker_modules/CITE-seq-Count/1.4.5
FROM ubuntu:22.04
ENV PACKAGES procps locales gcc libstdc++-10-dev libcurl4 libc6 python3 python3-pip python3-dev git
RUN apt-get update && \
apt-get install -y --no-install-recommends ${PACKAGES} && \
apt-get clean
RUN locale-gen en_US.UTF-8
ENV LC_ALL=en_US.utf-8
ENV LANG=en_US.utf-8
ENV LC_ALL=C.UTF-8
ENV LANG=C.UTF-8
RUN git clone https://github.com/Hoohm/CITE-seq-Count.git \
&& cd CITE-seq-Count \
&& git checkout 1.5.0-alpha \
&& pip3 install requests pooch \
&& pip3 install ./
#!/bin/sh
docker pull lbmc/cite_seq_count:1.5.0
docker build src/.docker_modules/CITE-seq-Count/1.5.0 -t 'lbmc/cite_seq_count:1.5.0'
docker push lbmc/cite_seq_count:1.5.0
# docker buildx build --platform linux/amd64,linux/arm64 -t "lbmc/cite_seq_count:1.5.0" --push src/.docker_modules/CITE-seq-Count/1.5.0
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