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Verified Commit 90f74bd7 authored by Laurent Modolo's avatar Laurent Modolo
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fix conda for hicstuff

parent d58b43e4
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......@@ -7,7 +7,8 @@ COPY hicstuff/* ./ /app/
RUN apt-get update && apt-get install -y procps bash
RUN apt update && apt install -y procps
RUN conda init \
RUN conda update -y -n base -c defaults conda \
&& conda init \
&& conda config --add channels r \
&& conda config --add channels defaults \
&& conda config --add channels conda-forge \
......@@ -30,4 +31,4 @@ RUN conda install -c conda-forge -y \
&& chmod -R +x /usr/local/lib/python3.10/lib-dynload/ \
&& echo "conda activate hicstuff" >> /root/.bashrc
ENV PATH /usr/local/envs/hicstuff/bin:/usr/local/condabin:$PATH
\ No newline at end of file
ENV PATH /usr/local/envs/hicstuff/bin:/usr/local/condabin:$PATH
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