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Verified Commit 5c6080a9 authored by Laurent Modolo's avatar Laurent Modolo
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Bowtie2/test.sh: fix nf path

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src/nf_modules/Bowtie2/tests/tests.sh
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nextflow src/nf_modules/Bowtie2/tests/index.nf \
./nextflow src/nf_modules/Bowtie2/tests/index.nf \
-c src/nf_modules/Bowtie2/bowtie2.config \
-profile docker \
--fasta "data/tiny_dataset/fasta/tiny_v2.fasta"
nextflow src/nf_modules/Bowtie2/tests/mapping_single.nf \
./nextflow src/nf_modules/Bowtie2/tests/mapping_single.nf \
-c src/nf_modules/Bowtie2/bowtie2.config \
-profile docker \
--index "data/tiny_dataset/fasta/*.bt2" \
--fastq "data/tiny_dataset/fastq/tiny*_S.fastq"
nextflow src/nf_modules/Bowtie2/tests/mapping_paired.nf \
./nextflow src/nf_modules/Bowtie2/tests/mapping_paired.nf \
-c src/nf_modules/Bowtie2/bowtie2.config \
-profile docker \
--index "data/tiny_dataset/fasta/*.bt2" \
......
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