README.md: change list of tools to table

README.md

@@ -78,26 +78,28 @@ src/nf_modules/Bowtie2/tests/tests.sh
 
 ## Available tools
 
-- BEDtools nf: ok / docker: ok / sge: ok
-- Bowtie2 nf: ok / docker: ok / sge: ok
-- FastQC nf: no / docker: ok / sge: ok
-- HISAT2 nf: no / docker: ok / sge: ok
-- HTSeq nf: ok / docker: ok / sge: ok
-- Kallisto nf: ok / docker: ok / sge: ok
-- MultiQC nf: no / docker: ok / sge: ok
-- RSEM nf: ok / docker: ok / sge: ok
-- SAMtools nf: ok / docker: ok / sge: ok
-- SRAtoolkit nf: no / docker: ok / sge: ok
-- Salmon nf: no / docker: ok / sge: ok
-- TopHat nf: no / docker: ok / sge: ok
-- Trimmomatic nf: no / docker: ok / sge: ok
-- UrQt nf: ok / docker: ok / sge: ok
-- canu nf: ok / docker: ok / sge: ok
-- cutadapt nf: ok / docker: ok / sge: ok
-- deepTools nf: no / docker: ok / sge: ok
-- file_handle nf: no / docker: ok / sge: ok
-- pigz nf: no / docker: ok / sge: ok
-- sra-tools nf: ok / docker: no / sge: no
+| tool | nf module | docker module | sge module |
+|------|:---------:|:-------------:|:----------:|
+BEDtools | ok | ok | ok
+Bowtie2 | ok | ok | ok
+FastQC | **no** | ok | ok
+HISAT2 | **no** | ok | ok
+HTSeq | ok | ok | ok
+Kallisto | ok | ok | ok
+MultiQC | **no** | ok | ok
+RSEM | ok | ok | ok
+SAMtools | ok | ok | ok
+SRAtoolkit | **no** | ok | ok
+Salmon | **no** | ok | ok
+TopHat | **no** | ok | ok
+Trimmomatic | **no** | ok | ok
+UrQt | ok | ok | ok
+canu | ok | ok | ok
+cutadapt | ok | ok | ok
+deepTools | **no** | ok | ok
+file_handle | **no** | ok | ok
+pigz | **no** | ok | ok
+sra-tools | ok | **no** | **no**