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Bootstrap: docker
From: debian:stretch
%labels
MAINTAINER Laurent Modolo
%post
MULTIQC_VERSION=1.7
PACKAGES="build-essential \
python3-pip \
python3-setuptools \
python3-dev \
python3-wheel \
procps \
locales"
apt-get update && \
apt-get install -y --no-install-recommends ${PACKAGES} && \
apt-get clean
locale-gen en_US.UTF-8
LC_ALL=en_US.utf-8
LANG=en_US.utf-8
LC_ALL=C.UTF-8
LANG=C.UTF-8
pip3 install multiqc==${MULTIQC_VERSION}
%environment
export KALLISTO_VERSION=0.44.0
export locale-gen en_US.UTF-8
export LC_ALL=en_US.utf-8
export LANG=en_US.utf-8
export LC_ALL=C.UTF-8
export LANG=C.UTF-8
%runscript
exec /bin/bash "$@"