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e0c416f2ae2aaa351ec93d320315b4dca9d92d1c
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20
TEMPLATE
dev
fmortreu-master-patch-11d2
hicstuff
master
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nf-core-template-merge-1.13
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subworkflows/local/hicstuff_sub.nf: remove some unused import and rename the SAMTOOLS_SORT process
subworkflows/local/hicstuff_sub.nf: update
subworkflows/local/hicstuff_sub.nf: update
modules/nf-core/custom/filterbam/main.nf: add new module
TO FIX markduplicates picard
suppr view
correct path samtools sort
correct path of markduplicates
TO FIX markduplicates pcr filter option
Merge pull request #169 from nf-core/dev
Merge pull request #168 from maxulysse/release_2.1.0
Apply suggestions from code review
Update conf/public_aws_ecr.config
Apply suggestions from code review
update version in CHANGELOG
Merge branch 'dev' into release_2.1.0
Merge pull request #159 from nf-core/nf-core-template-merge-2.8
bump version
prettier
Merge branch 'dev' into nf-core-template-merge-2.8
Merge pull request #166 from adamrtalbot/public_aws_ecr_profile
Revert linting.yml
Update setup-nextflow gha
Add BOWTIE2_ALIGN_TRIMMED to use mulled container
Merge branch 'dev' into public_aws_ecr_profile
Add public_aws_ecr profile for using public ECR images
Merge pull request #165 from adamrtalbot/update_modules
black
ubuntu:20.04 to nf-core version
quay.io
Update local modules
Add default registry to quay.io
Update all NF-Core modules to latest version which includes no quay.io prefix
hicstuff pcr filter module
hicstuff distance law option
hicstuff fragment & filter plot option correction
hicstuff filter events module
Different matrix building
Template update for nf-core/tools version 2.8
Merge pull request #155 from jzohren/master
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