.travis.yml

CHANGELOG.md

Dockerfile

README.md

conf/curie.config

conf/multiqc_config.yaml

conf/test.config

docs/README.md

docs/configuration/adding_your_own.md

docs/configuration/local.md

docs/configuration/reference_genomes.md

docs/installation.md

docs/troubleshooting.md

docs/usage.md

environment.yml

main.nf

nextflow.config