.gitattributes

.github/CONTRIBUTING.md

.github/ISSUE_TEMPLATE/bug_report.md

.github/ISSUE_TEMPLATE/bug_report.yml

.github/ISSUE_TEMPLATE/config.yml

.github/ISSUE_TEMPLATE/feature_request.md

.github/ISSUE_TEMPLATE/feature_request.yml

.github/workflows/awsfulltest.yml

.github/workflows/awstest.yml

.github/workflows/ci.yml

.github/workflows/linting_comment.yml

CHANGELOG.md

CITATIONS.md

README.md

assets/multiqc_config.yaml

assets/nf-core-hic_logo.png

assets/nf-core-hic_logo_light.png

assets/sendmail_template.txt

bin/scrape_software_versions.py

conf/base.config