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LBMC
Hub
hic
Commits
ad8881f0
Commit
ad8881f0
authored
5 years ago
by
nservant
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update images for travis and docker
parent
16803930
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.travis.yml
+1
-1
1 addition, 1 deletion
.travis.yml
nextflow.config
+4
-2
4 additions, 2 deletions
nextflow.config
with
5 additions
and
3 deletions
.travis.yml
+
1
−
1
View file @
ad8881f0
...
...
@@ -11,7 +11,7 @@ before_install:
# PRs to master are only ok if coming from dev branch
-
'
[
$TRAVIS_PULL_REQUEST
=
"false"
]
||
[
$TRAVIS_BRANCH
!=
"master"
]
||
([
$TRAVIS_PULL_REQUEST_SLUG
=
$TRAVIS_REPO_SLUG
]
&&
[
$TRAVIS_PULL_REQUEST_BRANCH
=
"dev"
])'
# Pull the docker image first so the test doesn't wait for this
-
docker pull n
f
core
/
hic:dev
-
docker pull n
servant/nf-
core
-
hic:dev
# Fake the tag locally so that the pipeline runs properly
-
docker tag nfcore/hic:dev nfcore/hic:latest
...
...
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nextflow.config
+
4
−
2
View file @
ad8881f0
...
...
@@ -12,8 +12,9 @@
params
{
//
Container
slug
.
Stable
releases
should
specify
release
tag
!
//
Developmental
code
should
specify
:
latest
container
=
'nfcore/hic:latest'
//
Developmental
code
should
specify
:
latest
//
container
=
'nfcore/hic:latest'
container
=
'nservant/nf-core-hic:latest'
//
Workflow
flags
//
TODO
nf
-
core
:
Specify
your
pipeline
'
s
command
line
flags
...
...
@@ -35,6 +36,7 @@ params {
custom_config_version
=
'master'
}
//
Load
base
.
config
by
default
for
all
pipelines
includeConfig
'conf/base.config'
...
...
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