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Commit aaa37964 authored by nservant's avatar nservant
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[MODIF] update environment

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environment.yml
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# You can use this file to create a conda environment for this pipeline: # You can use this file to create a conda environment for this pipeline:
# conda env create -f environment.yml # conda env create -f environment.yml
name: nf-core-hic-1.2.1dev name: nf-core-hic-1.3.0dev
channels: channels:
- conda-forge - conda-forge
- bioconda - bioconda
...@@ -19,9 +19,11 @@ dependencies: ...@@ -19,9 +19,11 @@ dependencies:
- bioconda::samtools=1.9 - bioconda::samtools=1.9
- bioconda::multiqc=1.8 - bioconda::multiqc=1.8
## Dev tools
- bioconda::hicexplorer=3.4.3 - bioconda::hicexplorer=3.4.3
- bioconda::bioconductor-hitc=1.32.0 - bioconda::bioconductor-hitc=1.32.0
- conda-forge::r-optparse=1.6.6 - conda-forge::r-optparse=1.6.6
- bioconda::ucsc-bedgraphtobigwig=377
- pip: - pip:
- cooltools - cooltools==0.3.2
- fanc - fanc==0.8.30
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