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Hi there!

Thanks for telling us about a problem with the pipeline. Please delete this text and anything that's not relevant from the template below:

Describe the bug

A clear and concise description of what the bug is.

Steps to reproduce

Steps to reproduce the behaviour:

  1. Command line: nextflow run ...
  2. See error: Please provide your error message

Expected behaviour

A clear and concise description of what you expected to happen.

System:

  • Hardware: [e.g. HPC, Desktop, Cloud...]
  • Executor: [e.g. slurm, local, awsbatch...]
  • OS: [e.g. CentOS Linux, macOS, Linux Mint...]
  • Version [e.g. 7, 10.13.6, 18.3...]

Nextflow Installation:

  • Version: [e.g. 0.31.0]

Container engine:

  • Engine: [e.g. Conda, Docker or Singularity]
  • version: [e.g. 1.0.0]
  • Image tag: [e.g. nfcore/hic:1.0.0]

Additional context

Add any other context about the problem here.