Skip to content
Snippets Groups Projects
Commit c27ac9cb authored by Laurent Modolo's avatar Laurent Modolo
Browse files

hisat2: add v2.1.0

parent 746ce102
No related branches found
No related tags found
No related merge requests found
Show whitespace changes
Inline Side-by-side
apps/hisat2/.gitignore 0 → 100644
+ 1
− 0
View file @ c27ac9cb
*/
apps/hisat2/install_2.0.0.sh
+ 6
− 5
View file @ c27ac9cb
...@@ -45,3 +45,4 @@ make ...@@ -45,3 +45,4 @@ make
cp hisat2 ../${HISAT2_VERSION}/bin && \ cp hisat2 ../${HISAT2_VERSION}/bin && \
cp hisat2-* ../${HISAT2_VERSION}/bin && \ cp hisat2-* ../${HISAT2_VERSION}/bin && \
rm -Rf hisat2-${HISAT2_VERSION}-beta rm -Rf hisat2-${HISAT2_VERSION}-beta
rm -Rf hisat2-${HISAT2_VERSION}-beta.zip
apps/hisat2/install_2.1.0.sh
+ 6
− 5
View file @ c27ac9cb
...@@ -36,12 +36,13 @@ ...@@ -36,12 +36,13 @@
source ../build_env.sh source ../build_env.sh
HISAT2_VERSION=2.1.0 HISAT2_VERSION=2.1.0
curl -k -L http://ccb.jhu.edu/software/hisat2/downloads/hisat2-${HISAT2_VERSION}-beta-source.zip -o hisat2_linux-v${HISAT2_VERSION}.zip curl -k -L http://ccb.jhu.edu/software/hisat2/dl/hisat2-${HISAT2_VERSION}-source.zip -o hisat2_linux-v${HISAT2_VERSION}.zip
unzip hisat2_linux-v${HISAT2_VERSION}.zip unzip hisat2_linux-v${HISAT2_VERSION}.zip
mkdir ${HISAT2_VERSION} mkdir ${HISAT2_VERSION}
mkdir ${HISAT2_VERSION}/bin mkdir ${HISAT2_VERSION}/bin
cd hisat2-${HISAT2_VERSION}-beta cd hisat2-${HISAT2_VERSION}
make make
cp hisat2 ../${HISAT2_VERSION}/bin && \ cp hisat2 ../${HISAT2_VERSION}/bin && \
cp hisat2-* ../${HISAT2_VERSION}/bin && \ cp hisat2-* ../${HISAT2_VERSION}/bin && \
rm -Rf hisat2-${HISAT2_VERSION}-beta rm -Rf hisat2-${HISAT2_VERSION}
rm -Rf hisat2-${HISAT2_VERSION}.zip
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Please register or to comment