Merge branch 'master' of gitlab_lbmc:PSMN/modules

1ef5f05e · Laurent Modolo · bbe94a62 · a9514021 · 1ef5f05e · 1ef5f05e
Commit 1ef5f05e authored 6 years ago by Laurent Modolo
--- a/apps/BCFtools/install_1.7.sh
+++ b/apps/BCFtools/install_1.7.sh
--- a/apps/BEDtools/install_2.25.0.sh
+++ b/apps/BEDtools/install_2.25.0.sh
--- a/apps/Bowtie2/install_2.3.2.sh
+++ b/apps/Bowtie2/install_2.3.2.sh
--- a/apps/Bowtie2/install_2.3.4.1.sh
+++ b/apps/Bowtie2/install_2.3.4.1.sh
--- a/apps/CDHIT/install_4.6.8.sh
+++ b/apps/CDHIT/install_4.6.8.sh
--- a/apps/deepTools/install_3.0.2.sh
+++ b/apps/deepTools/install_3.0.2.sh
--- a/apps/FastQC/install_0.11.5.sh
+++ b/apps/FastQC/install_0.11.5.sh
--- a/apps/GATK/install_4.0.10.1.sh
+++ b/apps/GATK/install_4.0.10.1.sh
--- a/apps/HTSeq/install_0.8.0.sh
+++ b/apps/HTSeq/install_0.8.0.sh
--- a/apps/HTSeq/install_0.9.1.sh
+++ b/apps/HTSeq/install_0.9.1.sh
--- a/apps/Kallisto/install_0.43.1.sh
+++ b/apps/Kallisto/install_0.43.1.sh
--- a/apps/Kallisto/install_0.44.0.sh
+++ b/apps/Kallisto/install_0.44.0.sh
--- a/apps/MACS2/install_2.1.1.20160309.sh
+++ b/apps/MACS2/install_2.1.1.20160309.sh
@@ -36,7 +36,7 @@
 source ../build_env.sh
 module load Python/2.7.13

-MACS2_VERSION=2.1.1.20160309
+MACS2_VERSION=2.1.2
 MACS2_ROOT=/Xnfs/lbmcdb/common/modules/apps/MACS2/${MACS2_VERSION}
 mkdir -p ${MACS2_VERSION}/lib/python2.7/dist-packages/
 PYTHONPATH=${MACS2_ROOT}lib/python2.7/dist-packages/:$PYTHONPATH

--- a/apps/MultiQC/install_0.9.sh
+++ b/apps/MultiQC/install_0.9.sh
--- a/apps/MultiQC/install_1.0.sh
+++ b/apps/MultiQC/install_1.0.sh
--- a/apps/MUSIC/install_6613c53.sh
+++ b/apps/MUSIC/install_6613c53.sh
--- a/apps/RSEM/install_1.3.0.sh
+++ b/apps/RSEM/install_1.3.0.sh
--- a/apps/RSEM/install_1.3.1.sh
+++ b/apps/RSEM/install_1.3.1.sh
--- a/apps/Salmon/install_0.8.2.sh
+++ b/apps/Salmon/install_0.8.2.sh
--- a/apps/SAMtools/install_1.5.sh
+++ b/apps/SAMtools/install_1.5.sh