src/RibosomeProfiling.config: add slurm profile

src/RibosomeProfiling.config

 profiles {
+  slurm {
+    process{
+      withName: trimming {
+        beforeScript = "source $baseDir/.conda_psmn.sh"
+        conda = "$baseDir/.conda_envs/cutadapt_2.4"
+        executor = "slurm"
+        cpus = 1
+        memory = "128GB"
+        time = "24h"
+        clusterOptions = "--partition=Lake"
+      }
+      withName: rRNA_removal {
+        beforeScript = "source $baseDir/.conda_psmn.sh"
+        conda = "$baseDir/.conda_envs/bowtie2_2.3.4.1"
+        executor = "slurm"
+        cpus = 32
+        memory = "192GB"
+        time = "24h"
+        clusterOptions = "--partition=Lake"
+      }
+      withName: hisat2_human {
+        beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
+        module = "hisat2/2.1.0:samtools/1.7"
+        executor = "sge"
+        clusterOptions = "-cwd -V"
+        executor = "slurm"
+        cpus = 32
+        memory = "64GB"
+        time = "24h"
+        clusterOptions = "--partition=Lake"
+      }
+      withName: index_bam {
+        beforeScript = "source $baseDir/.conda_psmn.sh"
+        conda = "$baseDir/.conda_envs/samtools_1.7"
+        executor = "slurm"
+        cpus = 1
+        memory = "20GB"
+        time = "24h"
+        clusterOptions = "--partition=Lake"
+      }
+      withName: counting {
+        beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
+        module = "htseq/0.11.2"
+        executor = "slurm"
+        cpus = 1
+        memory = "20GB"
+        time = "24h"
+        clusterOptions = "--partition=Lake"
+      }
+    }
+  }
   sge {
     process{
       withName: trimming {