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Commit 14b28e7e authored by cbedet's avatar cbedet
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change data for subset to test the pipeline

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./nextflow run src/RNAseq_cec.nf \
-profile psmn \
--fastq "data/*_R{1,2}.fastq.gz" \
--fastq "subset/*_R{1,2}.fastq.gz" \
--cds_fasta "data/c_elegans.PRJNA13758.WS278.all_transcripts.fa" \
--genomic_fasta "data/c_elegans.PRJNA13758.WS278.genomic.fa" \
--genomic_gff3 "data/c_elegans.PRJNA13758.WS278.annotations.gff3" \
......
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