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Verified Commit 1efc9788 authored by Laurent Modolo's avatar Laurent Modolo
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add kmerclust module

parent 13c5b824
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kmerclust @ fa432617
Subproject commit fa432617ab1e7b8eea3c4d671ce9e8948653e6f6
process MERGEKMER {
tag "$specie"
label 'big_mem_multi_cpus'
container "lbmc/kmerclust:0.0.1"
publishDir "results/${params.kmer_size}/${specie}/", mode: 'copy'
input:
tuple val(specie), path(csv)
output:
tuple val(specie), path("*.pdf"), emit: pdf
path "versions.yml" , emit: versions
script:
def args = task.ext.args ?: ''
"""
Rscript ../bin/kmerclust.R ${params.csv} ${csv} ${specie}
cat <<-END_VERSIONS > versions.yml
"${task.process}":
Rkmerclust: 0.0.1
END_VERSIONS
"""
}
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