v0.1.5: add --intermediate-bigwig (fix output name)

Cargo.lock

@@ -64,7 +64,8 @@ dependencies = [
 ]
 
 [[package]]
-version = "0.1.3"
+name = "bamcalib"
+version = "0.1.4"
 dependencies = [
  "bam",
  "bigtools",

Cargo.toml

@@ -4,7 +4,7 @@
 
 [package]
 name = "bamcalib"
-version = "0.1.4"
+version = "0.1.5"
 edition = "2021"
 description = "A command line tools to compute normalized bigwig from calibrated bam of a Chip-Seq experiment"
 license = "AGPL-3.0-or-later"

src/bed.rs

@@ -238,19 +238,20 @@ impl BedGraphWrapper {
         if intermediate_bigwig {
             bedwrapper.bed.reset();
             bedwrapper.bed.or_stats.intermediate_bigwig(true, true);
-            let mut path = PathBuf::from(file_ip);
-            path.set_extension("ip.bigwig");
+            let mut path_ip = PathBuf::from(file_ip);
+            path_ip.set_extension("OR.bigwig");
             BedGraphWrapper::write_bigwig_old_norm(
                 bedwrapper.clone(),
-                &path.to_str().unwrap(),
+                &path_ip.to_str().unwrap(),
                 thread_local,
             );
             bedwrapper.bed.reset();
             bedwrapper.bed.or_stats.intermediate_bigwig(true, false);
-            path.set_extension("wce.bigwig");
+            let mut path_wce = PathBuf::from(file_wce);
+            path_wce.set_extension("OR.bigwig");
             BedGraphWrapper::write_bigwig_old_norm(
                 bedwrapper,
-                &path.to_str().unwrap(),
+                &path_wce.to_str().unwrap(),
                 thread_local,
             );
         }

src/main.rs

@@ -13,7 +13,7 @@ use clap::Parser;
 #[derive(Parser, Debug)]
 #[command(name = "bamcalib")]
 #[command(author = "Laurent Modolo <laurent.modolo@ens-lyon.fr>")]
-#[command(version = "1.0.4")]
+#[command(version = "1.0.5")]
 #[command(about = "Compute calibrated density from calibration mapping data", long_about = None)]
 struct Args {
     /// sorted bam file for the IP data