psmn: remove mail report from config files

src/nf_modules/kallisto/mapping_paired.config

@@ -24,7 +24,7 @@ profiles {
         beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
         module = "kallisto/0.44.0"
         executor = "sge"
-        clusterOptions = "-m e -cwd -V"
+        clusterOptions = "-cwd -V"
         cpus = 16
         memory = "30GB"
         time = "24h"

src/nf_modules/kallisto/mapping_single.config

@@ -24,7 +24,7 @@ profiles {
         beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
         module = "kallisto/0.44.0"
         executor = "sge"
-        clusterOptions = "-m e -cwd -V"
+        clusterOptions = "-cwd -V"
         cpus = 16
         memory = "30GB"
         time = "24h"

src/nf_modules/macs2/peak_calling.config

@@ -24,7 +24,7 @@ profiles {
         beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
         module = "macs2/2.1.2"
         executor = "sge"
-        clusterOptions = "-m e -cwd -V"
+        clusterOptions = "-cwd -V"
         cpus = 16
         memory = "30GB"
         time = "24h"

src/nf_modules/multiqc/multiqc_paired.config

@@ -33,7 +33,7 @@ profiles {
         beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
         module = "fastqc/0.11.5"
         executor = "sge"
-        clusterOptions = "-m e -cwd -V"
+        clusterOptions = "-cwd -V"
         cpus = 1
         memory = "5GB"
         time = "6h"
@@ -45,7 +45,7 @@ profiles {
         beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
         module = "multiqc/1.0"
         executor = "sge"
-        clusterOptions = "-m e -cwd -V"
+        clusterOptions = "-cwd -V"
         cpus = 1
         memory = "5GB"
         time = "6h"

src/nf_modules/multiqc/multiqc_single.config

@@ -32,7 +32,7 @@ profiles {
         beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
         module = "fastqc/0.11.5"
         executor = "sge"
-        clusterOptions = "-m e -cwd -V"
+        clusterOptions = "-cwd -V"
         cpus = 1
         memory = "5GB"
         time = "6h"
@@ -44,7 +44,7 @@ profiles {
         beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
         module = "multiqc/1.0"
         executor = "sge"
-        clusterOptions = "-m e -cwd -V"
+        clusterOptions = "-cwd -V"
         cpus = 1
         memory = "5GB"
         time = "6h"

src/nf_modules/music/peak_calling_single.config

@@ -40,7 +40,7 @@ profiles {
         beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
         module = "music/6613c53"
         executor = "sge"
-        clusterOptions = "-m e -cwd -V"
+        clusterOptions = "-cwd -V"
         cpus = 1
         memory = "20GB"
         time = "12h"
@@ -50,7 +50,7 @@ profiles {
         beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
         module = "music/6613c53"
         executor = "sge"
-        clusterOptions = "-m e -cwd -V"
+        clusterOptions = "-cwd -V"
         cpus = 1
         memory = "20GB"
         time = "12h"
@@ -60,7 +60,7 @@ profiles {
         beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
         module = "music/6613c53"
         executor = "sge"
-        clusterOptions = "-m e -cwd -V"
+        clusterOptions = "-cwd -V"
         cpus = 1
         memory = "20GB"
         time = "12h"

src/nf_modules/rsem/indexing.config

@@ -24,7 +24,7 @@ profiles {
         beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
         module = "rsem/1.3.0:samtools/1.7"
         executor = "sge"
-        clusterOptions = "-m e -cwd -V"
+        clusterOptions = "-cwd -V"
         cpus = 16
         memory = "30GB"
         time = "24h"

src/nf_modules/rsem/quantification_paired.config

@@ -24,7 +24,7 @@ profiles {
         beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
         module = "rsem/1.3.0:samtools/1.7"
         executor = "sge"
-        clusterOptions = "-m e -cwd -V"
+        clusterOptions = "-cwd -V"
         cpus = 16
         memory = "30GB"
         time = "24h"

src/nf_modules/rsem/quantification_single.config

@@ -24,7 +24,7 @@ profiles {
         beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
         module = "rsem/1.3.0:samtools/1.7"
         executor = "sge"
-        clusterOptions = "-m e -cwd -V"
+        clusterOptions = "-cwd -V"
         cpus = 16
         memory = "30GB"
         time = "24h"

src/nf_modules/sambamba/index_bams.config

@@ -24,7 +24,7 @@ profiles {
         beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
         module = "sambamba/0.6.7"
         executor = "sge"
-        clusterOptions = "-m e -cwd -V"
+        clusterOptions = "-cwd -V"
         cpus = 16
         memory = "30GB"
         time = "24h"

src/nf_modules/sambamba/sort_bams.config

@@ -24,7 +24,7 @@ profiles {
         beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
         module = "sambamba/0.6.7"
         executor = "sge"
-        clusterOptions = "-m e -cwd -V"
+        clusterOptions = "-cwd -V"
         cpus = 4
         memory = "30GB"
         time = "24h"

src/nf_modules/sambamba/split_bams.config

@@ -24,7 +24,7 @@ profiles {
         beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
         module = "sambamba/0.6.7"
         executor = "sge"
-        clusterOptions = "-m e -cwd -V"
+        clusterOptions = "-cwd -V"
         cpus = 16
         memory = "30GB"
         time = "24h"

src/nf_modules/samblaster/dedup_sams.config

@@ -24,7 +24,7 @@ profiles {
         beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
         module = "samblaster/0.1.24"
         executor = "sge"
-        clusterOptions = "-m e -cwd -V"
+        clusterOptions = "-cwd -V"
         cpus = 16
         memory = "30GB"
         time = "24h"

src/nf_modules/samtools/filter_bams.config

@@ -24,7 +24,7 @@ profiles {
         beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
         module = "samtools/1.7"
         executor = "sge"
-        clusterOptions = "-m e -cwd -V"
+        clusterOptions = "-cwd -V"
         cpus = 16
         memory = "30GB"
         time = "24h"

src/nf_modules/samtools/index_bams.config

@@ -24,7 +24,7 @@ profiles {
         beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
         module = "samtools/1.7"
         executor = "sge"
-        clusterOptions = "-m e -cwd -V"
+        clusterOptions = "-cwd -V"
         cpus = 1
         memory = "20GB"
         time = "12h"

src/nf_modules/samtools/sort_bams.config

@@ -24,7 +24,7 @@ profiles {
         beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
         module = "samtools/1.7"
         executor = "sge"
-        clusterOptions = "-m e -cwd -V"
+        clusterOptions = "-cwd -V"
         cpus = 16
         memory = "30GB"
         time = "24h"

src/nf_modules/samtools/split_bams.config

@@ -24,7 +24,7 @@ profiles {
         beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
         module = "samtools/1.7"
         executor = "sge"
-        clusterOptions = "-m e -cwd -V"
+        clusterOptions = "-cwd -V"
         cpus = 1
         memory = "20GB"
         time = "12h"

src/nf_modules/sratoolkit/fastqdump.config

@@ -24,7 +24,7 @@ profiles {
         beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
         module = "sratoolkit/2.8.2"
         executor = "sge"
-        clusterOptions = "-m e -cwd -V"
+        clusterOptions = "-cwd -V"
         cpus = 1
         memory = "20GB"
         time = "12h"

src/nf_modules/urqt/trimming_paired.config

@@ -24,7 +24,7 @@ profiles {
         beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
         module = "urqt/d62c1f8"
         executor = "sge"
-        clusterOptions = "-m e -cwd -V"
+        clusterOptions = "-cwd -V"
         memory = "5GB"
         cpus = 16
         time = "12h"

src/nf_modules/urqt/trimming_single.config

@@ -24,7 +24,7 @@ profiles {
         beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
         module = "urqt/d62c1f8"
         executor = "sge"
-        clusterOptions = "-m e -cwd -V"
+        clusterOptions = "-cwd -V"
         cpus = 16
         memory = "5GB"
         time = "12h"