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Verified Commit f3591b54 authored by Laurent Modolo's avatar Laurent Modolo
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singularity modules: fix typo in .def files

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with 19 additions and 19 deletions
......@@ -4,7 +4,7 @@ From: ubuntu:18.04
%labels
MAINTAINER Laurent Modolo
%pos
%post
mkdir -p /sps /pbs /scratch
KALLISTO_VERSION=0.44.0
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......@@ -2,7 +2,7 @@ Bootstrap: docker
From: ubuntu:18.04
%labels
MAINTAINER Laurent Modolo
%pos
%post
mkdir -p /sps /pbs /scratch
MACS_VERSION=2.1.2
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......@@ -4,7 +4,7 @@ From: debian:stretch
%labels
MAINTAINER Laurent Modolo
%pos
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mkdir -p /sps /pbs /scratch
MULTIQC_VERSION=1.0
PACKAGES="build-essential \
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......@@ -4,7 +4,7 @@ From: debian:stretch
%labels
MAINTAINER Laurent Modolo
%pos
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mkdir -p /sps /pbs /scratch
MULTIQC_VERSION=1.7
PACKAGES="build-essential \
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......@@ -4,7 +4,7 @@ From: alpine:3.8
%labels
MAINTAINER Laurent Modolo
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mkdir -p /sps /pbs /scratch
MUSIC_VERSION=6613c53
SAMTOOLS_VERSION=1.7
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......@@ -7,7 +7,7 @@ src/singularity_modules/picard/2.18.11/PicardCommandLine /usr/bin/
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MAINTAINER Laurent Modolo
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mkdir -p /sps /pbs /scratch
PICARD_VERSION=2.18.11
PACKAGES="default-jre \
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......@@ -4,7 +4,7 @@ From: ubuntu:18.04
%labels
MAINTAINER Laurent Modolo
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mkdir -p /sps /pbs /scratch
PIGZ_VERSION=2.4
PACKAGES=pigz=${PIGZ_VERSION}*
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......@@ -4,7 +4,7 @@ From: ubuntu:18.04
%labels
MAINTAINER Laurent Modolo
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mkdir -p /sps /pbs /scratch
RSEM_VERSION=1.3.0
BOWTIE2_VERSION=2.3.4.1
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......@@ -4,7 +4,7 @@ From: ubuntu:18.04
%labels
MAINTAINER Laurent Modolo
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mkdir -p /sps /pbs /scratch
SALMON_VERSION=0.8.2
PACKAGES="curl \
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......@@ -4,7 +4,7 @@ From: ubuntu:18.04
%labels
MAINTAINER Laurent Modolo
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mkdir -p /sps /pbs /scratch
SAMBAMBA_VERSION=0.6.7
PACKAGES="curl=7.58.0* \
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......@@ -4,7 +4,7 @@ From: ubuntu:18.04
%labels
MAINTAINER Laurent Modolo
%pos
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mkdir -p /sps /pbs /scratch
SAMBAMBA_VERSION=0.6.9
PACKAGES="curl=7.58.0* \
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......@@ -4,7 +4,7 @@ From: ubuntu:18.04
%labels
MAINTAINER Laurent Modolo
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mkdir -p /sps /pbs /scratch
SAMBLASTER_VERSION=0.1.24
PACKAGES="curl \
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......@@ -4,7 +4,7 @@ From: alpine:3.8
%labels
MAINTAINER Laurent Modolo
%pos
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mkdir -p /sps /pbs /scratch
SAMTOOLS_VERSION=1.7
PACKAGES="git \
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......@@ -4,7 +4,7 @@ From: ubuntu:18.04
%labels
MAINTAINER Laurent Modolo
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mkdir -p /sps /pbs /scratch
SRATOOLKIT_VERSION=2.8.2
PACKAGES=sra-toolkit=${SRATOOLKIT_VERSION}*
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......@@ -4,7 +4,7 @@ From: ubuntu:18.04
%labels
MAINTAINER Laurent Modolo
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mkdir -p /sps /pbs /scratch
TOPHAT_VERSION=2.1.1
PACKAGES=tophat=${BOWTIE2_VERSION}*
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......@@ -4,7 +4,7 @@ From: ubuntu:18.04
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MAINTAINER Laurent Modolo
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mkdir -p /sps /pbs /scratch
TRIMMOMATIC_VERSION=0.36
PACKAGES=trimmomatic=${TRIMMOMATIC_VERSION}*
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......@@ -4,7 +4,7 @@ From: debian:jessie
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MAINTAINER Laurent Modolo
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mkdir -p /sps /pbs /scratch
UCSC_VERSION=375
PACKAGES="apt-utils \
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......@@ -4,7 +4,7 @@ From: debian:stretch
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MAINTAINER Laurent Modolo
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mkdir -p /sps /pbs /scratch
UMI_TOOLS_VERSION=1.0.0
PACKAGES="bash \
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......@@ -4,7 +4,7 @@ From: debian:9
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MAINTAINER Laurent Modolo
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mkdir -p /sps /pbs /scratch
URQT_VERSION=d62c1f8
PACKAGES="git \
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