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This repository is a template containing scripts to help you build your own nextflow pipeline.
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Infer identity of myoblasts, at several development stages, through Seurat single-cell clustering analysis.
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Scripts for paper Evaluation of genome and base editing tools in maize protoplasts (Fierlej et al, Front. Plant Sci. 2022)
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Functional analysis of RNAseq differential expression analysis, on competence mutants. Use of COG annotation for enrichment analysis in Legionella pneumophila.
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RNA-seq analysis of cell layer-specific expression of gene PhDEF in Petunia petals
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A single-cell RNA-Seq data analysis performed with scanpy, starting from the integration of multiple datasets for removing the batch effect, up to cell trajectory inference with PAGA
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