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This repository is a template containing scripts to help you build your own nextflow pipeline.

Scripts for paper Evaluation of genome and base editing tools in maize protoplasts (Fierlej et al, Front. Plant Sci. 2022)

Functional analysis of RNAseq differential expression analysis, on competence mutants. Use of COG annotation for enrichment analysis in Legionella pneumophila.

Genotypy is a tool to detect genomic barcodes inserted into specific loci from any kind of sequencing data

This project allows to display the size distribution of genomic intervals inside every bed files located in a given directory

Copie du pipeline de Maxime Lepetit, pour y adapter mon workflow

Analysis of the composition biais within the exons

Pipeline dedicated to ChIPseq.

This repository is a template containing scripts to help you build your own nextflow pipeline.

script allowing the visualization of the coverage in bigwig files