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Program analyzing QY2H data (.fcs files) and generating affinity ladder. A GUI has been developed for later release in the context of the publication to come.

This repository is a template containing scripts to help you build your own nextflow pipeline.

This repository is a template containing scripts to help you build your own nextflow pipeline.

A program and a set of tools for QC and analysis of coding transcripts obtained after parsing of .gff3 and genome .fa files.

Database of public ChIA-PET data to visualise proximal interactions.

This repository is a template containing scripts to help you build your own nextflow pipeline.

This repository is a template containing scripts to help you build your own nextflow pipeline.

This project aims to create plots that will represent the coverage of transcripts in different conditions

script allowing the visualization of the coverage in bigwig files

Source code for generating the main figures of the article "Reduction of a sothcastic model of gene expression: Lagrangian dynamics gives acces to basins of attraction as cell types and metastability".

François Gindraud, a postdoc in the SBDM Team, who has a loot of experience in software development, will be with us for a few months. François, will be able to give a series of small tutorials session on how to write better code.

Analysis of the composition biais within the exons