material for the R the basis formation
Analysis of cell-cell variability in Lymphoblastoid Cell Lines of the 1000 Genome project
SNP calling pipeline to find homozygote SNPs present in JU2817 strain but not in JU2859
A program and a set of tools for QC and analysis of coding transcripts obtained after parsing of .gff3 and genome .fa files.
This repository is a template containing scripts to help you build your own nextflow pipeline.
Formation on scRNA data analysis
script d'installation des machines virtuelles pour la formation RNAseq du CIRI (2020)
Biosphere environment for UE NGS VM
Coevolution analysis: Retrieval of orthologs of ComR and RocC in Legionella, alignment and phylogeny.
Positive selection screen on SARS-CoV-2 interactome: Analysis of DGINN pipeline's output.
Scripts exploring Chimp and Gorilla data with different packages for population genetics (pegas, adegenet, popGenome, etc.)
repo with analyses for the LBMC review article on RAPToR