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This repository is a template containing scripts to help you build your own nextflow pipeline.

Scripts used for scRNA-Seq and ChIP-Seq analysis in paper "Interplay between petal identity and cell layer identity in petunia flowers", by Cavallini-Speisser, Désert et al.

Biosphere environment for UE NGS VM

This is an R package dedicated to perform Differential expression analysis from HTSeq_count results file

Analysis of Chromosome Conformation Capture data (Hi-C)