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A program and a set of tools for QC and analysis of coding transcripts obtained after parsing of .gff3 and genome .fa files.
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LBMC / SBDM / idr
GNU Affero General Public License v3.0R package to compute IDR (Irreproductible Discovery Rate)
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LBMC / Hub / formations / ENS L3 stats
GNU Affero General Public License v3.0Updated -
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Database of public ChIA-PET data to visualise proximal interactions.
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CAN / UNIX command line
CeCILL Free Software License Agreement v2.1Updated -
LBMC / Bernard / Chipseq
MIT LicenseUpdated -
This repository is a template containing scripts to help you build your own nextflow pipeline.
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Arnaud Duvermy / HTRfit
MIT LicenseUpdated -
Xavier Grand / bolero
CeCILL Free Software License Agreement v2.1Updated -
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LBMC / Hub / formations / ENS M1 ML
GNU Affero General Public License v3.0Updated -
LBMC / SBDM / nucount
OtherUpdated -
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LBMC / Delattre / kmerclust
GNU Affero General Public License v3.0Updated -
Ghislain Durif / ENS M1 ML
GNU Affero General Public License v3.0Updated -
bsamson / vap
MIT LicenseVisium Analysis Pipeline to process 10x Visium data from pituitary tumors
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