Explore projects

This repository is a template containing scripts to help you build your own nextflow pipeline.

Database of public ChIA-PET data to visualise proximal interactions.

Analysis of Chromosome Conformation Capture data (Hi-C)

Visium Analysis Pipeline to process 10x Visium data from pituitary tumors

This repository is a template containing scripts to help you build your own nextflow pipeline.

Scripts for paper Evaluation of genome and base editing tools in maize protoplasts (Fierlej et al, Front. Plant Sci. 2022)

Source code of the algorithm CARDAMOM developed for inferring GRN from timestamped scRNA-seq data

Analysis of the composition biais within the exons