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This repository is a template containing scripts to help you build your own nextflow pipeline.

Functional analysis of RNAseq differential expression analysis, on competence mutants. Use of COG annotation for enrichment analysis in Legionella pneumophila.

Scripts for paper Evaluation of genome and base editing tools in maize protoplasts (Fierlej et al, Front. Plant Sci. 2022)

Program analyzing QY2H data (.fcs files) and generating affinity ladder. A GUI has been developed for later release in the context of the publication to come.

script allowing the visualization of the coverage in bigwig files

A program and a set of tools for QC and analysis of coding transcripts obtained after parsing of .gff3 and genome .fa files.

This repository is a template containing scripts to help you build your own nextflow pipeline.

This repository is a template containing scripts to help you build your own nextflow pipeline.

Copie du pipeline de Maxime Lepetit, pour y adapter mon workflow