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Program analyzing QY2H data (.fcs files) and generating affinity ladder. A GUI has been developed for later release in the context of the publication to come.

This repository is a template containing scripts to help you build your own nextflow pipeline.

This project aims to create plots that will represent the coverage of transcripts in different conditions

This project allows to display the size distribution of genomic intervals inside every bed files located in a given directory

This repository is a template containing scripts to help you build your own nextflow pipeline.

This repository is a template containing scripts to help you build your own nextflow pipeline.

Source code for generating the main figures of the article "Reduction of a sothcastic model of gene expression: Lagrangian dynamics gives acces to basins of attraction as cell types and metastability".

Create venn diagram from 2 bed files

Pipeline dedicated to ChIPseq.

This repository is a template containing scripts to help you build your own nextflow pipeline.

François Gindraud, a postdoc in the SBDM Team, who has a loot of experience in software development, will be with us for a few months. François, will be able to give a series of small tutorials session on how to write better code.

This repository is a template containing scripts to help you build your own nextflow pipeline.

Functional analysis of RNAseq differential expression analysis, on competence mutants. Use of COG annotation for enrichment analysis in Legionella pneumophila.

script allowing the visualization of the coverage in bigwig files