ssh_session_adduser.sh

+sudo useradd -m -s /bin/bash -g users -G adm,docker,dialout,cdrom,floppy,audio,dip,video,plugdev,netdev $1
+sudo cp /etc/skel/.* /home/$1
+sudo passwd $1 << EOF
+$1
+$1
+EOF
+

ssh_session_init.sh

+# scp -i ~/.ssh/id_ifb ssh_session_init.sh ssh_session_adduser.sh 2020_participants_mail.txt ubuntu@134.158.247.127:
+# ssh -i ~/.ssh/id_ifb ubuntu@134.158.247.127
+# bash ssh_session_init.sh 2020_participants_mail.txt
+
+cat $1 | sed -e "s/@[^,]*[,]*//g" | tr ' ' '\n' | awk '{system("bash ssh_session_adduser.sh "$0)}'
+sudo sed -i 's|PasswordAuthentication no|PasswordAuthentication yes|' /etc/ssh/sshd_config
+sudo systemctl restart sshd

ubuntu-shellinabox.yaml

+- hosts: all
+  tasks:
+
+  - name: Delete buggy OpenSSL python package
+    ansible.builtin.file:
+      path: /usr/lib/python3/dist-packages/OpenSSL
+      state: absent
+
+  - name: Reinstall pyopenssl
+    ansible.builtin.pip:
+      executable: pip3
+      name: pyopenssl
+      state: forcereinstall
+
+  - name: Update the system
+    apt:
+      upgrade: dist
+
+  - name: Install requirements
+    apt:
+      name: 
+        - openssl
+        - shellinabox
+        - stress
+      state: latest
+
+  - name: Configure shell in a box 
+    shell: sed -i 's|SHELLINABOX_PORT=4200|SHELLINABOX_PORT=443|' /etc/default/shellinabox
+
+  - name: Configure network
+    shell: iptables -t filter -A INPUT -p tcp --dport 443 -j ACCEPT && iptables -t filter -A OUTPUT -p tcp --dport 443 -j ACCEPT && iptables-save
+
+  - name: Restart services
+    systemd:
+      name: "{{ item }}" 
+      enabled: yes
+      state: restarted
+    loop:
+      - shellinabox 

unix_course_registration_mail.txt

+Dear all,
+
+We will start the Unix / command line training course next week, in a 1h / week format every Tuesday between 13h and 14h next week (the 29/09).
+
+The training course will be 100% on videoconference, you will need.
+—A modern browser to connect to the videoconference (and a microphone and/or a fast keyboard)
+—A modern browser to do the practicals
+
+The objectives of this training course are the following:
+—Overcoming your fear of command-line interfaces
+—Basic knowledge on operating systems
+—Files and folders manipulation
+—Text data manipulation
+—Processes control
+—Pipping (chaining of tools)
+—Networking
+—Virtualization
+
+If you already choose the Tuesday in the previous poll, you are considered as registered. For the other, we have 7 places left, so you can register with the following form:
+
+https://evento.renater.fr/survey/unix-command-line-training-course-weh6plht
+
+I will send this email to the other labs of the SFR Biosciences bioscience this afternoon if there are still some place left.
+
+Best,
+
+-------------------------------------------------------------------------------
+
+Dear all,
+
+We will start the Unix / command line training course next week, in a 1h / week format every Tuesday between 13h and 14h next week (the 29/09).
+
+The training course will be 100% on videoconference, you will need.
+—A modern browser to connect to the videoconference (and a microphone and/or a fast keyboard)
+—A modern browser to do the practicals
+
+The objectives of this training course are the following:
+—Overcoming your fear of command-line interfaces
+—Basic knowledge on operating systems
+—Files and folders manipulation
+—Text data manipulation
+—Processes control
+—Pipping (chaining of tools)
+—Networking
+—Virtualization
+
+If you already choose the Tuesday in the previous poll, you are considered as registered. For the other, we have 4 places left, so you can register with the following form:
+
+https://evento.renater.fr/survey/unix-command-line-training-course-weh6plht
+
+I will send this email to the other labs of the SFR Biosciences bioscience this afternoon if there are still some place left.
+
+Best,
+
+-------------------------------------------------------------------------------
+
+Dear all,
+
+You registered on the Unix / command line training course.
+To follow the first session of this course you will need to log on the entVisio service. 
+
+https://ent-services.ens-lyon.fr/entVisio/index.php
+
+To the LBMC_bioinfo channel with the password biocomputing
+
+
+We will start tomorrow (29/09) at 1 p.m., don’t forget your microphone and headphone if you share your office !
+
+Best,

www/github-pandoc.css

+/*! normalize.css v2.1.3 | MIT License | git.io/normalize */
+
+/* ==========================================================================
+   HTML5 display definitions
+   ========================================================================== */
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+/**
+ * Correct `block` display not defined in IE 8/9.
+ */
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+ article,
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+ figcaption,
+ figure,
+ footer,
+ header,
+ hgroup,
+ main,
+ nav,
+ section,
+ summary {
+     display: block;
+ }
+ 
+ /**
+  * Correct `inline-block` display not defined in IE 8/9.
+  */
+ 
+ audio,
+ canvas,
+ video {
+     display: inline-block;
+ }
+ 
+ /**
+  * Prevent modern browsers from displaying `audio` without controls.
+  * Remove excess height in iOS 5 devices.
+  */
+ 
+ audio:not([controls]) {
+     display: none;
+     height: 0;
+ }
+ 
+ /**
+  * Address `[hidden]` styling not present in IE 8/9.
+  * Hide the `template` element in IE, Safari, and Firefox < 22.
+  */
+ 
+ [hidden],
+ template {
+     display: none;
+ }
+ 
+ /* ==========================================================================
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+ /**
+  * 1. Set default font family to sans-serif.
+  * 2. Prevent iOS text size adjust after orientation change, without disabling
+  *    user zoom.
+  */
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+  */
+ 
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+ a {
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+ }
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+ /**
+  * Address `outline` inconsistency between Chrome and other browsers.
+  */
+ 
+ a:focus {
+     outline: thin dotted;
+ }
+ 
+ /**
+  * Improve readability when focused and also mouse hovered in all browsers.
+  */
+ 
+ a:active,
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+ }
+ 
+ /* ==========================================================================
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+ /**
+  * Address variable `h1` font-size and margin within `section` and `article`
+  * contexts in Firefox 4+, Safari 5, and Chrome.
+  */
+ 
+ h1 {
+     font-size: 2em;
+     margin: 0.67em 0;
+ }
+ 
+ /**
+  * Address styling not present in IE 8/9, Safari 5, and Chrome.
+  */
+ 
+ abbr[title] {
+     border-bottom: 1px dotted;
+ }
+ 
+ /**
+  * Address style set to `bolder` in Firefox 4+, Safari 5, and Chrome.
+  */
+ 
+ b,
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+     font-weight: bold;
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+     font-style: italic;
+ }
+ 
+ /**
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+  */
+ 
+ hr {
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+     box-sizing: content-box;
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+ }
+ 
+ /**
+  * Address styling not present in IE 8/9.
+  */
+ 
+ mark {
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+ code,
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+  * Improve readability of pre-formatted text in all browsers.
+  */
+ 
+ pre {
+     white-space: pre-wrap;
+ }
+ 
+ /**
+  * Set consistent quote types.
+  */
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+  */
+ 
+ small {
+     font-size: 80%;
+ }
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+ /**
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+ 
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+ sup {
+     font-size: 75%;
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+ }
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+    ========================================================================== */
+ 
+ /**
+  * Remove border when inside `a` element in IE 8/9.
+  */
+ 
+ img {
+     border: 0;
+ }
+ 
+ /**
+  * Correct overflow displayed oddly in IE 9.
+  */
+ 
+ svg:not(:root) {
+     overflow: hidden;
+ }
+ 
+ /* ==========================================================================
+    Figures
+    ========================================================================== */
+ 
+ /**
+  * Address margin not present in IE 8/9 and Safari 5.
+  */
+ 
+ figure {
+     margin: 0;
+ }
+ 
+ /* ==========================================================================
+    Forms
+    ========================================================================== */
+ 
+ /**
+  * Define consistent border, margin, and padding.
+  */
+ 
+ fieldset {
+     border: 1px solid #c0c0c0;
+     margin: 0 2px;
+     padding: 0.35em 0.625em 0.75em;
+ }
+ 
+ /**
+  * 1. Correct `color` not being inherited in IE 8/9.
+  * 2. Remove padding so people aren't caught out if they zero out fieldsets.
+  */
+ 
+ legend {
+     border: 0; /* 1 */
+     padding: 0; /* 2 */
+ }
+ 
+ /**
+  * 1. Correct font family not being inherited in all browsers.
+  * 2. Correct font size not being inherited in all browsers.
+  * 3. Address margins set differently in Firefox 4+, Safari 5, and Chrome.
+  */
+ 
+ button,
+ input,
+ select,
+ textarea {
+     font-family: inherit; /* 1 */
+     font-size: 100%; /* 2 */
+     margin: 0; /* 3 */
+ }
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+ /**
+  * Address Firefox 4+ setting `line-height` on `input` using `!important` in
+  * the UA stylesheet.
+  */
+ 
+ button,
+ input {
+     line-height: normal;
+ }
+ 
+ /**
+  * Address inconsistent `text-transform` inheritance for `button` and `select`.
+  * All other form control elements do not inherit `text-transform` values.
+  * Correct `button` style inheritance in Chrome, Safari 5+, and IE 8+.
+  * Correct `select` style inheritance in Firefox 4+ and Opera.
+  */
+ 
+ button,
+ select {
+     text-transform: none;
+ }
+ 
+ /**
+  * 1. Avoid the WebKit bug in Android 4.0.* where (2) destroys native `audio`
+  *    and `video` controls.
+  * 2. Correct inability to style clickable `input` types in iOS.
+  * 3. Improve usability and consistency of cursor style between image-type
+  *    `input` and others.
+  */
+ 
+ button,
+ html input[type="button"], /* 1 */
+ input[type="reset"],
+ input[type="submit"] {
+     -webkit-appearance: button; /* 2 */
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+ }
+ 
+ /**
+  * Re-set default cursor for disabled elements.
+  */
+ 
+ button[disabled],
+ html input[disabled] {
+     cursor: default;
+ }
+ 
+ /**
+  * 1. Address box sizing set to `content-box` in IE 8/9/10.
+  * 2. Remove excess padding in IE 8/9/10.
+  */
+ 
+ input[type="checkbox"],
+ input[type="radio"] {
+     box-sizing: border-box; /* 1 */
+     padding: 0; /* 2 */
+ }
+ 
+ /**
+  * 1. Address `appearance` set to `searchfield` in Safari 5 and Chrome.
+  * 2. Address `box-sizing` set to `border-box` in Safari 5 and Chrome
+  *    (include `-moz` to future-proof).
+  */
+ 
+ input[type="search"] {
+     -webkit-appearance: textfield; /* 1 */
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+ }
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+ /**
+  * Remove inner padding and search cancel button in Safari 5 and Chrome
+  * on OS X.
+  */
+ 
+ input[type="search"]::-webkit-search-cancel-button,
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+  */
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+ }
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+  * 2. Improve readability and alignment in all browsers.
+  */
+ 
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+     vertical-align: top; /* 2 */
+ }
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+ /* ==========================================================================
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+  */
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.highlight .nn{color:#000}.type-csharp .highlight .s,.type-csharp .highlight .sc{color:#a31515}
+ 
\ No newline at end of file

www/style_Rmd.css

+html, body {
+  font-size: 20px;
+}
+
+.pencadre{
+  border:4px; 
+  border-style:solid; 
+  border-color: #034b6f; 
+  background-color: #EEF3F9; 
+  padding: 1em;
+  text-align: left ;
+  border-radius : 5px 4px 3px 2px;
+  font-weight: 300;
+  font-size: 22px;
+}
+
+@font-face {
+    font-family: 'Yanone Kaffeesatz';
+    src:url("../www/YanoneKaffeesatz-Bold.ttf");
+}
+@font-face {
+    font-family: 'Raleway';
+    src:url("../www/Raleway-Regular.ttf");
+}
+
+@import url('https://fonts.googleapis.com/css2?family=Yanone+Kaffeesatz&display=swap');
+@import url('https://fonts.googleapis.com/css2?family=Raleway&display=swap');
+
+h3 { /* Header 3 */
+  font-family: 'Yanone Kaffeesatz', sans-serif;
+  color: #034b6f ;
+}
+
+h2 { /* Header 2 */
+  font-family: 'Yanone Kaffeesatz', sans-serif;
+  color: #034b6f ;
+}
+
+h1 { /* Header 1 */
+  font-family: 'Yanone Kaffeesatz', sans-serif;
+  color: #034b6f ;
+}
+
+.toggle {
+  display: none;
+}
+
+legend{
+  color: #034b6f ;
+}
+
+.pquestion {
+  color: darkgreen;
+  font-weight: bold;
+}
+
+.centered {
+  display: flex;
+  justify-content: center;
+}
+
+details summary {
+  padding: 1em;
+  font-family: 'Yanone Kaffeesatz', sans-serif;
+  font-size: 26px;
+  color: #034b6f ;
+  text-align: center;
+}
+details summary::before {
+  content: "▶";
+}
+details summary:hover::before {
+  content: "▷";
+}
+details summary:active::before {
+  content: "▼";
+}
+details summary:focus::before {
+  content: "▼";
+}
\ No newline at end of file