Hisat2 working on SGE and docker (!9) · Merge requests · LBMC / nextflow · GitLab

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Closed nfontrod requested to merge nfontrod/nextflow:master into master 6 years ago

Sep 20, 2018
- Updating forked nextflow · df3d609e
  nfontrod authored 6 years ago
  
  Merge branch 'master' of gitlab_lbmc:pipelines/nextflow
  df3d609e
- src/nf_modules/Hisat2/test/tests.sh : tests file · d2933d3f
  nfontrod authored 6 years ago
  
  d2933d3f
- src/nf_modules/Hisat2/test/bam_converter.nf : converting sam to bam · 1189b925
  nfontrod authored 6 years ago
  
  1189b925
- src/nf_modules/Hisat2/test/mapping_paired.nf : test mapping-PE · e4cefc2f
  nfontrod authored 6 years ago
  
  e4cefc2f
- src/nf_modules/Hisat2/test/mapping_single.nf : test mapping-SE · 519f8d1a
  nfontrod authored 6 years ago
  
  519f8d1a
- src/nf_modules/Hisat2/test/index.nf : test index creation · 4ea6d963
  nfontrod authored 6 years ago
  
  4ea6d963
- src/nf_modules/Hisat2/hisat2.config : nextflow configuration file for hista2 · cc5dda96
  nfontrod authored 6 years ago
  
  cc5dda96
- src/nf_modules/Hisat2/hisat2.nf : process nextflow for running hisat2 · 9ec9a8ad
  nfontrod authored 6 years ago
  
  9ec9a8ad
- src/docker_modules/HISAT2/2.0.0/Dockerfile : installing python to get the... · 0e1dda3a
  nfontrod authored 6 years ago
  
  src/docker_modules/HISAT2/2.0.0/Dockerfile : installing python to get the hsat2-build wrapper to work
  0e1dda3a