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# SPDX-FileCopyrightText: 2022 Laurent Modolo <laurent.modolo@ens-lyon.fr>
#
# SPDX-License-Identifier: AGPL-3.0-or-later
FROM debian:stretch-slim
ENV CLUSTALO_VERSION=1.2.4-1
ENV PACKAGES clustalo=${CLUSTALO_VERSION} \
procps
RUN apt-get update && \
apt-get install -y --no-install-recommends ${PACKAGES} && \
apt-get clean
#!/bin/sh
# SPDX-FileCopyrightText: 2022 Laurent Modolo <laurent.modolo@ens-lyon.fr>
#
# SPDX-License-Identifier: AGPL-3.0-or-later
docker pull lbmc/clustalo:1.2.4
# docker build src/.docker_modules/clustalo/1.2.4 -t 'lbmc/clustalo:1.2.4'
# docker push lbmc/clustalo:1.2.4
docker buildx build --platform linux/amd64,linux/arm64 -t "lbmc/clustalo:1.2.4" --push src/.docker_modules/clustalo/1.2.4
# SPDX-FileCopyrightText: 2022 Laurent Modolo <laurent.modolo@ens-lyon.fr>
#
# SPDX-License-Identifier: AGPL-3.0-or-later
FROM quay.io/biocontainers/crossmap:0.4.1--pyh5ca1d4c_0
MAINTAINER Laurent Modolo
#!/bin/sh
# SPDX-FileCopyrightText: 2022 Laurent Modolo <laurent.modolo@ens-lyon.fr>
#
# SPDX-License-Identifier: AGPL-3.0-or-later
docker pull lbmc/crossmap:0.4.1
# docker build src/.docker_modules/crossmap/0.4.1/ -t 'lbmc/crossmap:0.4.1'
# docker push lbmc/crossmap:0.4.1
......
# SPDX-FileCopyrightText: 2022 Laurent Modolo <laurent.modolo@ens-lyon.fr>
#
# SPDX-License-Identifier: AGPL-3.0-or-later
FROM alpine:3.8
MAINTAINER Laurent Modolo
......
#!/bin/sh
# SPDX-FileCopyrightText: 2022 Laurent Modolo <laurent.modolo@ens-lyon.fr>
#
# SPDX-License-Identifier: AGPL-3.0-or-later
docker pull lbmc/cutadapt:1.14
# docker build src/.docker_modules/cutadapt/1.14 -t 'lbmc/cutadapt:1.14'
# docker push lbmc/cutadapt:1.14
......
# SPDX-FileCopyrightText: 2022 Laurent Modolo <laurent.modolo@ens-lyon.fr>
#
# SPDX-License-Identifier: AGPL-3.0-or-later
FROM alpine:3.8
MAINTAINER Laurent Modolo
......
#!/bin/sh
# SPDX-FileCopyrightText: 2022 Laurent Modolo <laurent.modolo@ens-lyon.fr>
#
# SPDX-License-Identifier: AGPL-3.0-or-later
docker pull lbmc/cutadapt:1.15
# docker build src/.docker_modules/cutadapt/1.15 -t 'lbmc/cutadapt:1.15'
# docker push lbmc/cutadapt:1.15
......
# SPDX-FileCopyrightText: 2022 Laurent Modolo <laurent.modolo@ens-lyon.fr>
#
# SPDX-License-Identifier: AGPL-3.0-or-later
FROM alpine:3.8
MAINTAINER Laurent Modolo
......
#!/bin/sh
# SPDX-FileCopyrightText: 2022 Laurent Modolo <laurent.modolo@ens-lyon.fr>
#
# SPDX-License-Identifier: AGPL-3.0-or-later
docker pull lbmc/cutadapt:2.1
# docker build src/.docker_modules/cutadapt/2.1 -t 'lbmc/cutadapt:2.1'
# docker push lbmc/cutadapt:2.1
......
# SPDX-FileCopyrightText: 2022 Laurent Modolo <laurent.modolo@ens-lyon.fr>
#
# SPDX-License-Identifier: AGPL-3.0-or-later
FROM ubuntu:20.04
ENV DANPOS_VERSION="2f7f223"
......
#!/bin/sh
# SPDX-FileCopyrightText: 2022 Laurent Modolo <laurent.modolo@ens-lyon.fr>
#
# SPDX-License-Identifier: AGPL-3.0-or-later
docker pull lbmc/danpos3:2f7f223
# docker build src/.docker_modules/danpos3/2f7f223 -t 'lbmc/danpos3:2f7f223'
# docker push lbmc/danpos3:2f7f223
......
# SPDX-FileCopyrightText: 2022 Laurent Modolo <laurent.modolo@ens-lyon.fr>
#
# SPDX-License-Identifier: AGPL-3.0-or-later
FROM debian:stretch
MAINTAINER Laurent Modolo
......
#!/bin/sh
# SPDX-FileCopyrightText: 2022 Laurent Modolo <laurent.modolo@ens-lyon.fr>
#
# SPDX-License-Identifier: AGPL-3.0-or-later
docker pull lbmc/deeptools:3.0.2
# docker build src/.docker_modules/deeptools/3.0.2 -t 'lbmc/deeptools:3.0.2'
# docker push lbmc/deeptools:3.0.2
......
# SPDX-FileCopyrightText: 2022 Laurent Modolo <laurent.modolo@ens-lyon.fr>
#
# SPDX-License-Identifier: AGPL-3.0-or-later
FROM debian:stretch
MAINTAINER Laurent Modolo
......
#!/bin/sh
# SPDX-FileCopyrightText: 2022 Laurent Modolo <laurent.modolo@ens-lyon.fr>
#
# SPDX-License-Identifier: AGPL-3.0-or-later
docker pull lbmc/deeptools:3.1.1
# docker build src/.docker_modules/deeptools/3.1.1 -t 'lbmc/deeptools:3.1.1'
# docker push lbmc/deeptools:3.1.1
......
# SPDX-FileCopyrightText: 2022 Laurent Modolo <laurent.modolo@ens-lyon.fr>
#
# SPDX-License-Identifier: AGPL-3.0-or-later
FROM python:3.9-slim
MAINTAINER Lauret Modolo
......
#!/bin/sh
# SPDX-FileCopyrightText: 2022 Laurent Modolo <laurent.modolo@ens-lyon.fr>
#
# SPDX-License-Identifier: AGPL-3.0-or-later
docker pull lbmc/deeptools:3.5.0
# docker build src/.docker_modules/deeptools/3.5.0 -t 'lbmc/deeptools:3.5.0'
# docker push lbmc/deeptools:3.5.0
......
# SPDX-FileCopyrightText: 2022 Laurent Modolo <laurent.modolo@ens-lyon.fr>
#
# SPDX-License-Identifier: AGPL-3.0-or-later
FROM python:3.8-slim
MAINTAINER Lauret Modolo
......
#!/bin/sh
# SPDX-FileCopyrightText: 2022 Laurent Modolo <laurent.modolo@ens-lyon.fr>
#
# SPDX-License-Identifier: AGPL-3.0-or-later
docker pull lbmc/deeptools:3.5.1
# docker build src/.docker_modules/deeptools/3.5.1 -t 'lbmc/deeptools:3.5.1'
# docker push lbmc/deeptools:3.5.1
......