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b6575e65 · b6575e65 · b6575e65 · b6575e65 · ceca3ce0 · ceca3ce0
--- a/src/docker_modules/cutadapt/1.14/docker_init.sh
+++ b/src/docker_modules/cutadapt/1.14/docker_init.sh
--- a/src/docker_modules/deepTools/3.0.2/docker_init.sh
+++ b/src/docker_modules/deepTools/3.0.2/docker_init.sh
--- a/src/docker_modules/file_handle/0.1.1/docker_init.sh
+++ b/src/docker_modules/file_handle/0.1.1/docker_init.sh
--- a/src/docker_modules/pigz/2.4/docker_init.sh
+++ b/src/docker_modules/pigz/2.4/docker_init.sh
--- a/src/example_chipseq.nf
+++ b/src/example_chipseq.nf
--- a/src/example_marseq.nf
+++ b/src/example_marseq.nf
--- a/src/example_variant_calling.nf
+++ b/src/example_variant_calling.nf
--- a/src/fasta_sampler.nf
+++ b/src/fasta_sampler.nf
--- a/src/in2p3.pbs
+++ b/src/in2p3.pbs
--- a/src/install_nextflow.sh
+++ b/src/install_nextflow.sh
--- a/src/nextflow.config
+++ b/src/nextflow.config
--- a/src/nf_modules/BEDtools/bedtools.config
+++ b/src/nf_modules/BEDtools/bedtools.config
--- a/src/nf_modules/BEDtools/bedtools.nf
+++ b/src/nf_modules/BEDtools/bedtools.nf
--- a/src/nf_modules/BEDtools/tests/fasta_from_bed.nf
+++ b/src/nf_modules/BEDtools/tests/fasta_from_bed.nf
--- a/src/nf_modules/BEDtools/tests/tests.sh
+++ b/src/nf_modules/BEDtools/tests/tests.sh
--- a/src/nf_modules/Bowtie2/bowtie2.config
+++ b/src/nf_modules/Bowtie2/bowtie2.config
--- a/src/nf_modules/Bowtie2/bowtie2.nf
+++ b/src/nf_modules/Bowtie2/bowtie2.nf
--- a/src/nf_modules/Bowtie2/tests/index.nf
+++ b/src/nf_modules/Bowtie2/tests/index.nf
--- a/src/nf_modules/Bowtie2/tests/mapping_paired.nf
+++ b/src/nf_modules/Bowtie2/tests/mapping_paired.nf
--- a/src/nf_modules/Bowtie2/tests/mapping_single.nf
+++ b/src/nf_modules/Bowtie2/tests/mapping_single.nf
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