Compare revisions

a8472a83 · a8472a83 · ceca3ce0 · ceca3ce0 · ceca3ce0 · ceca3ce0
--- a/src/nf_modules/music/peak_calling_single.nf
+++ b/src/nf_modules/music/peak_calling_single.nf
--- a/src/nf_modules/music/tests.sh
+++ b/src/nf_modules/music/tests.sh
--- a/src/nf_modules/picard/main.nf
+++ b/src/nf_modules/picard/main.nf
--- a/src/nf_modules/porechop/main.nf
+++ b/src/nf_modules/porechop/main.nf
--- a/src/nf_modules/rasusa/main.nf
+++ b/src/nf_modules/rasusa/main.nf
--- a/src/nf_modules/rasusa/test.nf
+++ b/src/nf_modules/rasusa/test.nf
--- a/src/nf_modules/rasusa/test.sh
+++ b/src/nf_modules/rasusa/test.sh
--- a/src/nf_modules/rsem/indexing.config
+++ b/src/nf_modules/rsem/indexing.config
--- a/src/nf_modules/rsem/indexing.nf
+++ b/src/nf_modules/rsem/indexing.nf
--- a/src/nf_modules/rsem/quantification_paired.config
+++ b/src/nf_modules/rsem/quantification_paired.config
--- a/src/nf_modules/rsem/quantification_paired.nf
+++ b/src/nf_modules/rsem/quantification_paired.nf
--- a/src/nf_modules/rsem/quantification_single.config
+++ b/src/nf_modules/rsem/quantification_single.config
--- a/src/nf_modules/rsem/quantification_single.nf
+++ b/src/nf_modules/rsem/quantification_single.nf
--- a/src/nf_modules/rsem/tests.sh
+++ b/src/nf_modules/rsem/tests.sh
--- a/src/nf_modules/salmon/main.nf
+++ b/src/nf_modules/salmon/main.nf
--- a/src/nf_modules/sambamba/index_bams.config
+++ b/src/nf_modules/sambamba/index_bams.config
--- a/src/nf_modules/sambamba/index_bams.nf
+++ b/src/nf_modules/sambamba/index_bams.nf
--- a/src/nf_modules/sambamba/main.nf
+++ b/src/nf_modules/sambamba/main.nf
--- a/src/nf_modules/sambamba/sort_bams.config
+++ b/src/nf_modules/sambamba/sort_bams.config
--- a/src/nf_modules/sambamba/sort_bams.nf
+++ b/src/nf_modules/sambamba/sort_bams.nf
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